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The map label for this gene is 226949772

Identifier: 226949772

GI number: 226949772

Start: 2725087

End: 2725404

Strand: Reverse

Name: 226949772

Synonym: CLM_2712

Alternate gene names: NA

Gene position: 2725404-2725087 (Counterclockwise)

Preceding gene: 226949773

Following gene: 226949771

Centisome position: 65.59

GC content: 27.99

Gene sequence:

>318_bases
ATGATGCCAAATAAGTTCCTACAGTTTTTAAGCTTAACTAAAAAAGCAGGACATTTAGTAGAAGGATACAACAAATGTGA
AGAGGCTGTAACAAAAAAAATAGTTTATGCGGTTATAATATCTTGTGATGCTTCAGAAAATAGTAAAAATAAATTTAAAG
TAAAATGTGAAAAAAATAATATACCTTTAATAGAAGGTTATAGTGAAAAAGAACTAGGCAGCGTATTAGGAAGAGACTTT
ATAAAAATATTAGCTGTAAAGGATGAAGGTATGGCTAATAAGTTATTAAAATTATGGAATGATAGCCAAGAGCATTAG

Upstream 100 bases:

>100_bases
GAATGTTTTAATAAAGCATATAAATCTAAAAGATTAGAAAGAAATCTAGAAATTAAATTAGATGAAGAAGTTTATGAAAG
ATTAAAAGGTGAGATAGAAG

Downstream 100 bases:

>100_bases
TTTCGGGGGTGAATAATTTGGCAAAAATAAGAGTATATGAATTAGCTAAAGAATTAAACATATCAAGTAAAGAACTTATA
ACATTATTAGAAGAAGAATT

Product: ribosomal protein L7Ae family protein

Products: NA

Alternate protein names: Ribosomal E/Gadd; Ribosomal Protein; 50S Ribosomal E/Gadd; Ribosomal Ae; Ribosomal Region

Number of amino acids: Translated: 105; Mature: 105

Protein sequence:

>105_residues
MMPNKFLQFLSLTKKAGHLVEGYNKCEEAVTKKIVYAVIISCDASENSKNKFKVKCEKNNIPLIEGYSEKELGSVLGRDF
IKILAVKDEGMANKLLKLWNDSQEH

Sequences:

>Translated_105_residues
MMPNKFLQFLSLTKKAGHLVEGYNKCEEAVTKKIVYAVIISCDASENSKNKFKVKCEKNNIPLIEGYSEKELGSVLGRDF
IKILAVKDEGMANKLLKLWNDSQEH
>Mature_105_residues
MMPNKFLQFLSLTKKAGHLVEGYNKCEEAVTKKIVYAVIISCDASENSKNKFKVKCEKNNIPLIEGYSEKELGSVLGRDF
IKILAVKDEGMANKLLKLWNDSQEH

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11893; Mature: 11893

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMPNKFLQFLSLTKKAGHLVEGYNKCEEAVTKKIVYAVIISCDASENSKNKFKVKCEKNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCC
IPLIEGYSEKELGSVLGRDFIKILAVKDEGMANKLLKLWNDSQEH
CCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMPNKFLQFLSLTKKAGHLVEGYNKCEEAVTKKIVYAVIISCDASENSKNKFKVKCEKNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEEECCCC
IPLIEGYSEKELGSVLGRDFIKILAVKDEGMANKLLKLWNDSQEH
CCEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA