| Definition | Clostridium botulinum A2 str. Kyoto chromosome, complete genome. |
|---|---|
| Accession | NC_012563 |
| Length | 4,155,278 |
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The map label for this gene is 226949677
Identifier: 226949677
GI number: 226949677
Start: 2645947
End: 2646957
Strand: Reverse
Name: 226949677
Synonym: CLM_2617
Alternate gene names: NA
Gene position: 2646957-2645947 (Counterclockwise)
Preceding gene: 226949678
Following gene: 226949676
Centisome position: 63.7
GC content: 24.43
Gene sequence:
>1011_bases ATGAATATACAAGATATAAAACAAAAGTTAAATAGCAAAGAATATGATTTCTTAAGAAATAATGAACACTTAGGAGATAA TATAATCTTATTAACTACAGGAGGAAGTTATGCCTATGGTACTAATGTTGAAAGTAGTGATTTAGATATAAGGGGCATAG CTACAGAAAGAATAGAAGAATTAATAGGATTATCTTCATTTGAACAATTCGAAAATAAAGAAACAGATACTACAATATAT GTATTAAATAAAGTTATAAAGTTAATGATTAATAATAATCCCAATATAATAGAATTGTTAGGAACAAGAGATGATCATTT ATTTATTTGTAACCAATATGGTAAATTATTAAGAGATAATGTAAGCTTATTCTTATCTAAAAAAGTAGTACATAGTTTTG GTGGGTATGCTACAGCTCAATTAAGGAGACTTCAAAATGCCTTAGCTAGAGATTCTTATCCTCAACCTGAAAAGGAGCAG CACATATTAAATAGTATAAAGAATCAAATGGTGTCTTTTGAAGATAGATATAAAGAAATTACAAAAGAAAATATTAATTT GTATATAGATAAATCTGAGAAAGTAGATTTAGATAGTGAAATATTTATGAATGTCAACCTAAAAAATTATCCTTTAAGAG ATTTCAAAAATATATATTCAGAAATGAGTAATATAGTTAAAGATTATGAAAAGTTGAATCATAGAAATAGCAAAAAAGAC GAGTTGCATTTAAATAAACATGCATTACATTTGATTAGATTATTAAAAATGGGAACAGAATTACTAGAAGGTAAAGGAAT AAATACATATAGAGAAAAAGATAGAAGTTTATTATTAGATATAAGAAATGGTAAATATAGTTATGAAGAAATATTTGAAA TGGTAGATGAATATGAAAAAGATTTTAAATATGCGTCTGATAATACAGATTTACCCAACATGCCTAATTATAAAAAAGTA GAAGAGCTAGTTATAGAAATTAATAAAGGTGTGATAAATAATGCTAAATAA
Upstream 100 bases:
>100_bases GATGTGGATTTAGATATAAAATTCTGGTATGATTTAGAAAATAAATATAAAGTTAAGTTGGGAAAATAGTTAAATAATTA ATTAAGGAGTAAAAAATAAA
Downstream 100 bases:
>100_bases AAATATAAAAATTCAAATACCTAAAGGGGTAGAGTATATTATAAATATTTTACAAGAAAATGGTTATGAAGCATGTATAG TAGGTGGTGCAGTTAGAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MNIQDIKQKLNSKEYDFLRNNEHLGDNIILLTTGGSYAYGTNVESSDLDIRGIATERIEELIGLSSFEQFENKETDTTIY VLNKVIKLMINNNPNIIELLGTRDDHLFICNQYGKLLRDNVSLFLSKKVVHSFGGYATAQLRRLQNALARDSYPQPEKEQ HILNSIKNQMVSFEDRYKEITKENINLYIDKSEKVDLDSEIFMNVNLKNYPLRDFKNIYSEMSNIVKDYEKLNHRNSKKD ELHLNKHALHLIRLLKMGTELLEGKGINTYREKDRSLLLDIRNGKYSYEEIFEMVDEYEKDFKYASDNTDLPNMPNYKKV EELVIEINKGVINNAK
Sequences:
>Translated_336_residues MNIQDIKQKLNSKEYDFLRNNEHLGDNIILLTTGGSYAYGTNVESSDLDIRGIATERIEELIGLSSFEQFENKETDTTIY VLNKVIKLMINNNPNIIELLGTRDDHLFICNQYGKLLRDNVSLFLSKKVVHSFGGYATAQLRRLQNALARDSYPQPEKEQ HILNSIKNQMVSFEDRYKEITKENINLYIDKSEKVDLDSEIFMNVNLKNYPLRDFKNIYSEMSNIVKDYEKLNHRNSKKD ELHLNKHALHLIRLLKMGTELLEGKGINTYREKDRSLLLDIRNGKYSYEEIFEMVDEYEKDFKYASDNTDLPNMPNYKKV EELVIEINKGVINNAK >Mature_336_residues MNIQDIKQKLNSKEYDFLRNNEHLGDNIILLTTGGSYAYGTNVESSDLDIRGIATERIEELIGLSSFEQFENKETDTTIY VLNKVIKLMINNNPNIIELLGTRDDHLFICNQYGKLLRDNVSLFLSKKVVHSFGGYATAQLRRLQNALARDSYPQPEKEQ HILNSIKNQMVSFEDRYKEITKENINLYIDKSEKVDLDSEIFMNVNLKNYPLRDFKNIYSEMSNIVKDYEKLNHRNSKKD ELHLNKHALHLIRLLKMGTELLEGKGINTYREKDRSLLLDIRNGKYSYEEIFEMVDEYEKDFKYASDNTDLPNMPNYKKV EELVIEINKGVINNAK
Specific function: Unknown
COG id: COG3541
COG function: function code R; Predicted nucleotidyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39282; Mature: 39282
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIQDIKQKLNSKEYDFLRNNEHLGDNIILLTTGGSYAYGTNVESSDLDIRGIATERIEE CCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEECHHHHHHHH LIGLSSFEQFENKETDTTIYVLNKVIKLMINNNPNIIELLGTRDDHLFICNQYGKLLRDN HHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHH VSLFLSKKVVHSFGGYATAQLRRLQNALARDSYPQPEKEQHILNSIKNQMVSFEDRYKEI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TKENINLYIDKSEKVDLDSEIFMNVNLKNYPLRDFKNIYSEMSNIVKDYEKLNHRNSKKD HHCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ELHLNKHALHLIRLLKMGTELLEGKGINTYREKDRSLLLDIRNGKYSYEEIFEMVDEYEK HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH DFKYASDNTDLPNMPNYKKVEELVIEINKGVINNAK HCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNIQDIKQKLNSKEYDFLRNNEHLGDNIILLTTGGSYAYGTNVESSDLDIRGIATERIEE CCHHHHHHHHCCCCCHHHCCCCCCCCCEEEEECCCCEEECCCCCCCCCCEECHHHHHHHH LIGLSSFEQFENKETDTTIYVLNKVIKLMINNNPNIIELLGTRDDHLFICNQYGKLLRDN HHCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCEEEEHHHHHHHHHH VSLFLSKKVVHSFGGYATAQLRRLQNALARDSYPQPEKEQHILNSIKNQMVSFEDRYKEI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH TKENINLYIDKSEKVDLDSEIFMNVNLKNYPLRDFKNIYSEMSNIVKDYEKLNHRNSKKD HHCCCEEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH ELHLNKHALHLIRLLKMGTELLEGKGINTYREKDRSLLLDIRNGKYSYEEIFEMVDEYEK HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHH DFKYASDNTDLPNMPNYKKVEELVIEINKGVINNAK HCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA