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The map label for this gene is 226949482

Identifier: 226949482

GI number: 226949482

Start: 2498329

End: 2498922

Strand: Reverse

Name: 226949482

Synonym: CLM_2415

Alternate gene names: NA

Gene position: 2498922-2498329 (Counterclockwise)

Preceding gene: 226949485

Following gene: 226949480

Centisome position: 60.14

GC content: 26.77

Gene sequence:

>594_bases
ATGGCAAGCGATACATATCATCATGGTGACTTAAAGGAAAGTTTAATAATAGAGGGTTTAAAGTTATTTAATGAAGAAGG
GGCAGATAAATTTTCACTTAGAAAAGTAGCAGCTTTATGTAATGTAAGTCATTCAGCTCCATACAAACATTTTAAAAATA
AGGAAGAATTAATTAATGCAATATCTCAGTATGTATTTAGCGAATTTGAAAAATCCTTAAGGGAAATATCAGAAATGTAT
AAGGATGATCCTTACAAAAAAATTATGGAACTTGGGAAAAAATATGTTTGGTTTATGGTTGAAAACCCTGATTACTTAAA
ATTTTTATTTTTAAATAATCATAAATACGAAATTATAGTGGAGGAAAATAAACTTGAAACTAAAATTTCAGGAGCTTTTG
GATTATTTAAAAACTCTGCTATTGAATACTTAAAAAGCATAAATGTAAAAGAAGAAGAATATTCACAAGATGTGATAGCT
ATGTGGTCAATGGTACATGGAATTGCAGTAATGTTAGCAAATAAAACATTTATATATAGTGGAAATTACTTAGAACTTGT
TGAAAATATCATACATAAAAATCTTAAGTTCTAG

Upstream 100 bases:

>100_bases
GTAAACTTTAGTTTATTATACCCCTGAAAGTTTACACTGTCAACATAAGATGATACAATATATTATAATATATTTATATT
TTTAGAAAAGAGGTTATTAT

Downstream 100 bases:

>100_bases
ATTTTCATTTATAGTTGTTTGGTAATAAAATACAATTAGAAAAAATGGTCCGGTTTTAAATGAAAATGAACATATAATAC
TATGGCATAGCCATGAGAAA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcription Regulator TetR Family Protein; Regulatory Protein Tetr; Transcriptional Regulator TetR-Family; TetR-Family Protein Transcriptional Regulator; Regulatory Protein TetR; Transcriptional Regulator TetR; Sensor Histidine Kinase/Response Regulator; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MASDTYHHGDLKESLIIEGLKLFNEEGADKFSLRKVAALCNVSHSAPYKHFKNKEELINAISQYVFSEFEKSLREISEMY
KDDPYKKIMELGKKYVWFMVENPDYLKFLFLNNHKYEIIVEENKLETKISGAFGLFKNSAIEYLKSINVKEEEYSQDVIA
MWSMVHGIAVMLANKTFIYSGNYLELVENIIHKNLKF

Sequences:

>Translated_197_residues
MASDTYHHGDLKESLIIEGLKLFNEEGADKFSLRKVAALCNVSHSAPYKHFKNKEELINAISQYVFSEFEKSLREISEMY
KDDPYKKIMELGKKYVWFMVENPDYLKFLFLNNHKYEIIVEENKLETKISGAFGLFKNSAIEYLKSINVKEEEYSQDVIA
MWSMVHGIAVMLANKTFIYSGNYLELVENIIHKNLKF
>Mature_196_residues
ASDTYHHGDLKESLIIEGLKLFNEEGADKFSLRKVAALCNVSHSAPYKHFKNKEELINAISQYVFSEFEKSLREISEMYK
DDPYKKIMELGKKYVWFMVENPDYLKFLFLNNHKYEIIVEENKLETKISGAFGLFKNSAIEYLKSINVKEEEYSQDVIAM
WSMVHGIAVMLANKTFIYSGNYLELVENIIHKNLKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23047; Mature: 22916

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASDTYHHGDLKESLIIEGLKLFNEEGADKFSLRKVAALCNVSHSAPYKHFKNKEELINA
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH
ISQYVFSEFEKSLREISEMYKDDPYKKIMELGKKYVWFMVENPDYLKFLFLNNHKYEIIV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCEEEEEEECCCEEEEEE
EENKLETKISGAFGLFKNSAIEYLKSINVKEEEYSQDVIAMWSMVHGIAVMLANKTFIYS
ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GNYLELVENIIHKNLKF
CCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ASDTYHHGDLKESLIIEGLKLFNEEGADKFSLRKVAALCNVSHSAPYKHFKNKEELINA
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHH
ISQYVFSEFEKSLREISEMYKDDPYKKIMELGKKYVWFMVENPDYLKFLFLNNHKYEIIV
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCCEEEEEEECCCEEEEEE
EENKLETKISGAFGLFKNSAIEYLKSINVKEEEYSQDVIAMWSMVHGIAVMLANKTFIYS
ECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEE
GNYLELVENIIHKNLKF
CCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA