Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 226949059

GI number: 226949059

Start: 2039587

End: 2041608

Strand: Direct

Name: trg [C]

Synonym: CLM_1975

Alternate gene names: 226949059

Gene position: 2039587-2041608 (Clockwise)

Preceding gene: 226949058

Following gene: 226949064

Centisome position: 49.08

GC content: 27.7

Gene sequence:

>2022_bases
ATGTTTACTAAAGAAAATCTTAAGAAACTTAGTTTTAAAAAGAAGATAGTAATAACTTCTCTATTGATTTTTTTAATTTC
AATGAGTTTATTAACGGGTTTTACTTTTAAAATGGTAAGTAGTAAATTCAAAAATCAAGTTAGAGAAGATGGGTTAAACT
TAGCAAATCAAGTAAGCTATCAAATTACTTCATCTCAAAAAGCTACAAAGGAGATAGATAAAGTTTTAGCAGACAAAGTT
TTATCCATTTCAAAGATGGTTATAGAAAACAAAAATATTTCTAATGAATATTTAACCAGTGTTGCAGTAAAATGTAATAT
ACAAGAAATAAATATAACAGATAAAAATGGGAAAATAATATATTCAAATATGCCAGAAAACATAAACTATGTATATCCCT
TGGATTATTCTGGACAAGATATATTAAAGGGTAAAAAAGATGAAATTATTGAAGAAATAAGACAAAATAAAGTAAATCAT
AATTATTATAAGTATTGTGCATTAGCTATGCCTAATGGTGGTCTAATACAAACAGGTATTAATGCAAATGAAATCCACAA
TATTAATAAATCTGTAGATCCACAAATTATATTAGAAAAATTAACAAAAGATAGTAATATAAAATTTGCTTTAGTTATGG
ATAATAAACTTAAAGTTACCCACCATAGTGATAAAAAAAGGATAGGGAAAATTTTAACTGATACTGGAAGTAAAACTGCA
ATAGATACTGGGAAGAATTATACATCTACATATGATTATGAAGGTGAAAAAGTTTATGATATTATAATGCCTTTAAAAGA
TGAAAGTGGTAAACTATTAGGATCTATGGATATAGGAGTATCTTTAGCTACTCAAGAAACCGCTCTTAGAAATATATTAA
TAACTTCTATATTGATAAGCTTAATAACTTTTGTTTTAGCTGGATTAGTAATACTTTATATAATAAAACTATCTTTAAAA
CCACTAGATAATTTGTCTAGTATAGCTCAAAAGGTTTCAAAGGGTGATTTAACAGAAAAGGTTGAAATTGTTAATGAAGA
TGAAATTGGAAAGCTAAGCAAAATATTTAATACTATGATAGATAGTTTAAGAGAAATTACACGAAATATAAATAATTTTT
CAATACAGTTAGCTGGTTCCTCTCAGGAAATTTTATCCTCTGCAGAGCAAACTTCAGCAGTATCAGAGGAAATTTCTAGT
GCTACTGAAGAAATTGCTTCGGGAGCTGAAAATCAAGTGAAGGCTAGTAATGAATCTTCCCTATTAATGAATGATGTTAT
GGGAAATATGTATACTTTAAAAGAGGAGTTTGATGAAATAATATCTTTTTCTAATAATACGAATACATTAGCTTCAAAGG
GACAAGAAAACATGTCTAATATGGTGCAGCAAATGGCTACAATAAAAAATAGTGTGGTAAATTCATCTAATATAATGTAT
GATTTACAAAAGAATTCAGAGGAAATAGGAAATATTGTAGAAATTATAAATACTATAGCAGATCAAACTAATTTATTAGC
ATTAAATGCCTCCATTGAAGCTGCTAGAGCAGGAGAAGCTGGAAAAGGTTTTGCAGTAGTAGCAGATGAAGTTAGAAAAC
TTGCGGAAGAATCTATAAATTCTGCTAATAATATTAAGAATTTAATAATGAATACTCAAGATAAAACTAAGACTGCTTTA
AATTCTATAAAGGATGGTGCTTCACAATCTGAAAAAGGTGAAAGCATAGTTGCTGAGGTAAAAGAATCTTTAGGAGAAAT
TTTAAATTCATTTTCTAGTGTGAACCATAAGTTTGTAAGTGTAGATTCTATGATTACAGCTTCCAATGATAGTATTACAG
CTATGGCATCAAAATTATATGATATAGAAACCATATCTAATACAGCCTCTGCTAATACAGAAGAGGTAGCTGCTTCTACA
GAAGAACAGAGCGCTACCATAGAAGAAATTACTGAATCTATAGAGAAGTTAGTTAGTATGGTAGAAAATTTAAAGGAAAG
TGTATCTATATTTAAACTTTAA

Upstream 100 bases:

>100_bases
AGTTTAAATTTTGATTTTCGTTTGATTTAAATTTAAAAAATCATTATAATATACTTACATAATGCTAAATTATGTAATAA
TATTTAGGGGGATTAGTATA

Downstream 100 bases:

>100_bases
CTAATATAAAATGGAACCTAGATTAAAAAATCCAGGTTCCATTTTATATTCCTATATATATTAGATAAAGCCCCATAGCT
AATATAATTATTCCTAATAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 673; Mature: 673

Protein sequence:

>673_residues
MFTKENLKKLSFKKKIVITSLLIFLISMSLLTGFTFKMVSSKFKNQVREDGLNLANQVSYQITSSQKATKEIDKVLADKV
LSISKMVIENKNISNEYLTSVAVKCNIQEINITDKNGKIIYSNMPENINYVYPLDYSGQDILKGKKDEIIEEIRQNKVNH
NYYKYCALAMPNGGLIQTGINANEIHNINKSVDPQIILEKLTKDSNIKFALVMDNKLKVTHHSDKKRIGKILTDTGSKTA
IDTGKNYTSTYDYEGEKVYDIIMPLKDESGKLLGSMDIGVSLATQETALRNILITSILISLITFVLAGLVILYIIKLSLK
PLDNLSSIAQKVSKGDLTEKVEIVNEDEIGKLSKIFNTMIDSLREITRNINNFSIQLAGSSQEILSSAEQTSAVSEEISS
ATEEIASGAENQVKASNESSLLMNDVMGNMYTLKEEFDEIISFSNNTNTLASKGQENMSNMVQQMATIKNSVVNSSNIMY
DLQKNSEEIGNIVEIINTIADQTNLLALNASIEAARAGEAGKGFAVVADEVRKLAEESINSANNIKNLIMNTQDKTKTAL
NSIKDGASQSEKGESIVAEVKESLGEILNSFSSVNHKFVSVDSMITASNDSITAMASKLYDIETISNTASANTEEVAAST
EEQSATIEEITESIEKLVSMVENLKESVSIFKL

Sequences:

>Translated_673_residues
MFTKENLKKLSFKKKIVITSLLIFLISMSLLTGFTFKMVSSKFKNQVREDGLNLANQVSYQITSSQKATKEIDKVLADKV
LSISKMVIENKNISNEYLTSVAVKCNIQEINITDKNGKIIYSNMPENINYVYPLDYSGQDILKGKKDEIIEEIRQNKVNH
NYYKYCALAMPNGGLIQTGINANEIHNINKSVDPQIILEKLTKDSNIKFALVMDNKLKVTHHSDKKRIGKILTDTGSKTA
IDTGKNYTSTYDYEGEKVYDIIMPLKDESGKLLGSMDIGVSLATQETALRNILITSILISLITFVLAGLVILYIIKLSLK
PLDNLSSIAQKVSKGDLTEKVEIVNEDEIGKLSKIFNTMIDSLREITRNINNFSIQLAGSSQEILSSAEQTSAVSEEISS
ATEEIASGAENQVKASNESSLLMNDVMGNMYTLKEEFDEIISFSNNTNTLASKGQENMSNMVQQMATIKNSVVNSSNIMY
DLQKNSEEIGNIVEIINTIADQTNLLALNASIEAARAGEAGKGFAVVADEVRKLAEESINSANNIKNLIMNTQDKTKTAL
NSIKDGASQSEKGESIVAEVKESLGEILNSFSSVNHKFVSVDSMITASNDSITAMASKLYDIETISNTASANTEEVAAST
EEQSATIEEITESIEKLVSMVENLKESVSIFKL
>Mature_673_residues
MFTKENLKKLSFKKKIVITSLLIFLISMSLLTGFTFKMVSSKFKNQVREDGLNLANQVSYQITSSQKATKEIDKVLADKV
LSISKMVIENKNISNEYLTSVAVKCNIQEINITDKNGKIIYSNMPENINYVYPLDYSGQDILKGKKDEIIEEIRQNKVNH
NYYKYCALAMPNGGLIQTGINANEIHNINKSVDPQIILEKLTKDSNIKFALVMDNKLKVTHHSDKKRIGKILTDTGSKTA
IDTGKNYTSTYDYEGEKVYDIIMPLKDESGKLLGSMDIGVSLATQETALRNILITSILISLITFVLAGLVILYIIKLSLK
PLDNLSSIAQKVSKGDLTEKVEIVNEDEIGKLSKIFNTMIDSLREITRNINNFSIQLAGSSQEILSSAEQTSAVSEEISS
ATEEIASGAENQVKASNESSLLMNDVMGNMYTLKEEFDEIISFSNNTNTLASKGQENMSNMVQQMATIKNSVVNSSNIMY
DLQKNSEEIGNIVEIINTIADQTNLLALNASIEAARAGEAGKGFAVVADEVRKLAEESINSANNIKNLIMNTQDKTKTAL
NSIKDGASQSEKGESIVAEVKESLGEILNSFSSVNHKFVSVDSMITASNDSITAMASKLYDIETISNTASANTEEVAAST
EEQSATIEEITESIEKLVSMVENLKESVSIFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=399, Percent_Identity=28.3208020050125, Blast_Score=117, Evalue=3e-27,
Organism=Escherichia coli, GI2367378, Length=300, Percent_Identity=28.6666666666667, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1789453, Length=306, Percent_Identity=30.3921568627451, Blast_Score=109, Evalue=7e-25,
Organism=Escherichia coli, GI1788195, Length=281, Percent_Identity=29.5373665480427, Blast_Score=102, Evalue=7e-23,
Organism=Escherichia coli, GI1788194, Length=389, Percent_Identity=26.4781491002571, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74057; Mature: 74057

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTKENLKKLSFKKKIVITSLLIFLISMSLLTGFTFKMVSSKFKNQVREDGLNLANQVSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHE
QITSSQKATKEIDKVLADKVLSISKMVIENKNISNEYLTSVAVKCNIQEINITDKNGKII
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEECCCCEEE
YSNMPENINYVYPLDYSGQDILKGKKDEIIEEIRQNKVNHNYYKYCALAMPNGGLIQTGI
ECCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECC
NANEIHNINKSVDPQIILEKLTKDSNIKFALVMDNKLKVTHHSDKKRIGKILTDTGSKTA
CHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHCCCCCCE
IDTGKNYTSTYDYEGEKVYDIIMPLKDESGKLLGSMDIGVSLATQETALRNILITSILIS
ECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHH
LITFVLAGLVILYIIKLSLKPLDNLSSIAQKVSKGDLTEKVEIVNEDEIGKLSKIFNTMI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
DSLREITRNINNFSIQLAGSSQEILSSAEQTSAVSEEISSATEEIASGAENQVKASNESS
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCH
LLMNDVMGNMYTLKEEFDEIISFSNNTNTLASKGQENMSNMVQQMATIKNSVVNSSNIMY
HHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEE
DLQKNSEEIGNIVEIINTIADQTNLLALNASIEAARAGEAGKGFAVVADEVRKLAEESIN
EECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
SANNIKNLIMNTQDKTKTALNSIKDGASQSEKGESIVAEVKESLGEILNSFSSVNHKFVS
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VDSMITASNDSITAMASKLYDIETISNTASANTEEVAASTEEQSATIEEITESIEKLVSM
ECCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VENLKESVSIFKL
HHHHHHHHHHHCC
>Mature Secondary Structure
MFTKENLKKLSFKKKIVITSLLIFLISMSLLTGFTFKMVSSKFKNQVREDGLNLANQVSY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHE
QITSSQKATKEIDKVLADKVLSISKMVIENKNISNEYLTSVAVKCNIQEINITDKNGKII
EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHEEEEEEEEEEECCCCEEE
YSNMPENINYVYPLDYSGQDILKGKKDEIIEEIRQNKVNHNYYKYCALAMPNGGLIQTGI
ECCCCCCCCEEEECCCCCHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEECC
NANEIHNINKSVDPQIILEKLTKDSNIKFALVMDNKLKVTHHSDKKRIGKILTDTGSKTA
CHHHHCCCCCCCCHHHHHHHHCCCCCCEEEEEECCEEEEEECCHHHHHHHHHHCCCCCCE
IDTGKNYTSTYDYEGEKVYDIIMPLKDESGKLLGSMDIGVSLATQETALRNILITSILIS
ECCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEHHHHHHHHHHHHHHHHHH
LITFVLAGLVILYIIKLSLKPLDNLSSIAQKVSKGDLTEKVEIVNEDEIGKLSKIFNTMI
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH
DSLREITRNINNFSIQLAGSSQEILSSAEQTSAVSEEISSATEEIASGAENQVKASNESS
HHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCH
LLMNDVMGNMYTLKEEFDEIISFSNNTNTLASKGQENMSNMVQQMATIKNSVVNSSNIMY
HHHHHHHCHHHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEE
DLQKNSEEIGNIVEIINTIADQTNLLALNASIEAARAGEAGKGFAVVADEVRKLAEESIN
EECCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
SANNIKNLIMNTQDKTKTALNSIKDGASQSEKGESIVAEVKESLGEILNSFSSVNHKFVS
HHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
VDSMITASNDSITAMASKLYDIETISNTASANTEEVAASTEEQSATIEEITESIEKLVSM
ECCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHH
VENLKESVSIFKL
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA