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The map label for this gene is yaeB [C]

Identifier: 226948995

GI number: 226948995

Start: 1959886

End: 1960167

Strand: Reverse

Name: yaeB [C]

Synonym: CLM_1909

Alternate gene names: 226948995

Gene position: 1960167-1959886 (Counterclockwise)

Preceding gene: 226949002

Following gene: 226948993

Centisome position: 47.17

GC content: 26.24

Gene sequence:

>282_bases
TTGGTAGAGGGATTAAAGGATTTGGATAAAAATTCACATATAATAATTCTTTTTTATTTTAATAAATCTAAAGATTTTAA
TCTTATAACAAAAACTCCTTGGAGCGATGAAAAGAAAGGTGTGTTTTCTACTAGATCACCTAGAAGACCTAATCCTATAG
GCTTATCTATAGTAAAATTAATAGAAATAGATCATAATAAAATAATAATTAAAGGGATAGATATGTTAGATGGTACTCCT
GTTCTAGATATAAAACCCTATTCAGAAGAATTAAACCCTTAA

Upstream 100 bases:

>100_bases
ATCTATAGACTTTAGAATTCATATCTATAATAAAAGCTTATAATGCTTTAAAGCTAAATATTTATCTTATAAAAAAGCTT
TAATAGAAATAAAAGAAGAA

Downstream 100 bases:

>100_bases
TTACACATAAGATGGTGTCTCAAAATAAAATATATTTTCAGACACCATCTTATATTTAAAATTTAAAAAGTTCTTCAACT
TCATACTCTGCCATATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGTP
VLDIKPYSEELNP

Sequences:

>Translated_93_residues
MVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGTP
VLDIKPYSEELNP
>Mature_93_residues
MVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKLIEIDHNKIIIKGIDMLDGTP
VLDIKPYSEELNP

Specific function: Unknown

COG id: COG1720

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0066 (virR) family [H]

Homologues:

Organism=Homo sapiens, GI118600979, Length=91, Percent_Identity=47.2527472527472, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1786393, Length=94, Percent_Identity=40.4255319148936, Blast_Score=69, Evalue=7e-14,
Organism=Drosophila melanogaster, GI45552503, Length=88, Percent_Identity=46.5909090909091, Blast_Score=79, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24586408, Length=88, Percent_Identity=46.5909090909091, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001378 [H]

Pfam domain/function: PF01980 UPF0066 [H]

EC number: NA

Molecular weight: Translated: 10651; Mature: 10651

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS01318 UPF0066

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKL
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCEEEEEE
IEIDHNKIIIKGIDMLDGTPVLDIKPYSEELNP
EEECCCEEEEEECCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MVEGLKDLDKNSHIIILFYFNKSKDFNLITKTPWSDEKKGVFSTRSPRRPNPIGLSIVKL
CCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCEECCCCCCCCCCCCEEEEEE
IEIDHNKIIIKGIDMLDGTPVLDIKPYSEELNP
EEECCCEEEEEECCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]