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The map label for this gene is 226948937

Identifier: 226948937

GI number: 226948937

Start: 1885581

End: 1885916

Strand: Reverse

Name: 226948937

Synonym: CLM_1850

Alternate gene names: NA

Gene position: 1885916-1885581 (Counterclockwise)

Preceding gene: 226948940

Following gene: 226948924

Centisome position: 45.39

GC content: 29.46

Gene sequence:

>336_bases
GTGGAATTTGAACTTTTTAAAATAGAAACTTTTATACCAGAAGAATATGTAAAAAAATTAAGAAAAGCATTAAACTACAT
AGGTGCTCTTACAGTAGGAGGAAATTATGATAACTGTATGACGGTTTCCAGAGTTAAAGGCTCCTGGAGACCTTTAGGAG
GATCTACCCCTTTTAATGGAGATATAGGTGAAATATGTGAAGCAGAAGAATGTAAAGTAGAATTTTGCTGTACTAGAGAA
GTATTGAAAAATACAATAACTACCATAAAAAAGGTACATCCTTATGAAATACCTGTAATAAATATAATTCCCATATTAAA
TTCATTTGAATTTTAA

Upstream 100 bases:

>100_bases
TAAAAGAAAATTTTTACTTTTAATATTAAACAAATAATTTAGTATTTTAAATCTAGGCTATAATAATTATAGATATATAT
AGAAAGAAGGATGTTGCATC

Downstream 100 bases:

>100_bases
TTATTGTATATTAAGTTCTAATATTAAAAAAACAGCATAATAATAAATATATTCATTATGATAATTTTATTCATTGCTTT
AATGTGTTTTTTCTCTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MEFELFKIETFIPEEYVKKLRKALNYIGALTVGGNYDNCMTVSRVKGSWRPLGGSTPFNGDIGEICEAEECKVEFCCTRE
VLKNTITTIKKVHPYEIPVINIIPILNSFEF

Sequences:

>Translated_111_residues
MEFELFKIETFIPEEYVKKLRKALNYIGALTVGGNYDNCMTVSRVKGSWRPLGGSTPFNGDIGEICEAEECKVEFCCTRE
VLKNTITTIKKVHPYEIPVINIIPILNSFEF
>Mature_111_residues
MEFELFKIETFIPEEYVKKLRKALNYIGALTVGGNYDNCMTVSRVKGSWRPLGGSTPFNGDIGEICEAEECKVEFCCTRE
VLKNTITTIKKVHPYEIPVINIIPILNSFEF

Specific function: Unknown

COG id: COG3323

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678
- InterPro:   IPR017221 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 12641; Mature: 12641

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFELFKIETFIPEEYVKKLRKALNYIGALTVGGNYDNCMTVSRVKGSWRPLGGSTPFNG
CCCEEEEHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHCCCCCCCCCCCCCCCC
DIGEICEAEECKVEFCCTREVLKNTITTIKKVHPYEIPVINIIPILNSFEF
CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCC
>Mature Secondary Structure
MEFELFKIETFIPEEYVKKLRKALNYIGALTVGGNYDNCMTVSRVKGSWRPLGGSTPFNG
CCCEEEEHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCEEHHHCCCCCCCCCCCCCCCC
DIGEICEAEECKVEFCCTREVLKNTITTIKKVHPYEIPVINIIPILNSFEF
CHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA