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The map label for this gene is yobV [H]

Identifier: 226948882

GI number: 226948882

Start: 1824289

End: 1825233

Strand: Reverse

Name: yobV [H]

Synonym: CLM_1791

Alternate gene names: 226948882

Gene position: 1825233-1824289 (Counterclockwise)

Preceding gene: 226948909

Following gene: 226948881

Centisome position: 43.93

GC content: 24.97

Gene sequence:

>945_bases
ATGAAAATTAATAGATTATTGGCAATTGTTGTAATGCTTTTAAATAGAGAAAAAATATCTGCATCAGAATTAGCTGAAAA
ATTTGAGGTTTCTGTAAGAACAATTTATAGAGATATTGAAGCAATTAATCTTGCTGGAATTCCTATAGTTTCTCAAATTG
GAAATAATGGAGGATTTTATATTATAGATAACTATAAAATCAATCATCAACTTTTAACATTAGAAGATATGATCTCAATT
ATAGACGCTCTAAAAAACATGAATAAATTTTTAGATAATAAAAATGTTGAAATGGCCATTGAAAAAGTAAAAAATATTGT
TCCTAAAGAAAAAAAAGAAGTATTTGATTTACATTTTGAGCAAATGTGTATAGATACATTACCTTGGGGCTTTAAAAAAT
GTGAAGAAGAAAACTTAAAATACAAAATTATATATGATGCTGTAGATAACAAAAACTGTATAGCCTTTGATTATAGAAAC
TCAAAAGGTGAATATAATTGGAGACAGGTAGAGCCATTAACTCTTGTTTTTAAAGGTTTTTCATGGTATCTATTTTCCTT
TTGCAAATTAAAAAATGATTACCGATTTTTCAAATTATCAAGAATGGAAAATTTAACTGTTCTACATGAAAAAATTAATG
AAAATAGAATTTCCTATAAAGAATATATAAATATTAGTGAGAGTGAACAAGTACCTACAAGAGTTGTATTAAAGTTTTCT
GAAAGAGTTAGATATAGAATAGACGATTGTTTTGATAAAGATGAAATAAAGTTTCAAGAAGATGGTAGTGTAATTGTAGA
TACATATTTATTAGAAGATGACTGGATATATTCCATGATATTAAGTTACGGAGAATGTGTGGAAGTACTTGAACCCAATC
ATATTAGAGAAATTATAAAGGATAAATGTAAAAAAATTAATGATATATATTCAAATATGACATAG

Upstream 100 bases:

>100_bases
TTATGCAATTCCCCCAACAATTTCTCTCTAAACAATCTTACAAGTTATTAATTTGATATAATAAAATAGTCATTTCAAAT
TATGGGGGGTTTATAGATTC

Downstream 100 bases:

>100_bases
TGTTGTCAAAGCCTTCCTATATAATACAAATATAAGCATAAGGAAGGGGAATAAAATATGGAACAAATATATTGTCAAAG
TTGTGGAATGGCAATGAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IDALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWRQVEPLTLVFKGFSWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIKDKCKKINDIYSNMT

Sequences:

>Translated_314_residues
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IDALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWRQVEPLTLVFKGFSWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIKDKCKKINDIYSNMT
>Mature_314_residues
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFYIIDNYKINHQLLTLEDMISI
IDALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFEQMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRN
SKGEYNWRQVEPLTLVFKGFSWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIKDKCKKINDIYSNMT

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 37262; Mature: 37262

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFY
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCEE
IIDNYKINHQLLTLEDMISIIDALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFE
EEECEEECCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
QMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRNSKGEYNWRQVEPLTLVFKGF
HHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHHEEHHHH
SWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHH
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIK
HHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DKCKKINDIYSNMT
HHHHHHHHHHHCCC
>Mature Secondary Structure
MKINRLLAIVVMLLNREKISASELAEKFEVSVRTIYRDIEAINLAGIPIVSQIGNNGGFY
CCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCCCEE
IIDNYKINHQLLTLEDMISIIDALKNMNKFLDNKNVEMAIEKVKNIVPKEKKEVFDLHFE
EEECEEECCEEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHH
QMCIDTLPWGFKKCEEENLKYKIIYDAVDNKNCIAFDYRNSKGEYNWRQVEPLTLVFKGF
HHHHHHCCCCHHHHHCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCEECCHHHEEHHHH
SWYLFSFCKLKNDYRFFKLSRMENLTVLHEKINENRISYKEYINISESEQVPTRVVLKFS
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCHHHHHHHH
ERVRYRIDDCFDKDEIKFQEDGSVIVDTYLLEDDWIYSMILSYGECVEVLEPNHIREIIK
HHHHHHHHHCCCCCCCEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHH
DKCKKINDIYSNMT
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]