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The map label for this gene is 226948750

Identifier: 226948750

GI number: 226948750

Start: 1699918

End: 1700130

Strand: Direct

Name: 226948750

Synonym: CLM_1651

Alternate gene names: NA

Gene position: 1699918-1700130 (Clockwise)

Preceding gene: 226948749

Following gene: 226948751

Centisome position: 40.91

GC content: 26.29

Gene sequence:

>213_bases
ATGCTAAGTATGTATACAAGTTATATATGTATTTATTGTAAGAAAGAATTTGTTTTATTAACAGAAGAATTACAAAATAC
AAAAGGATACTTAGTATGTCCTTACTGTTCTAGTAGAAAAGTTAAGAAAGAAAAAATAACAGATAGCTTAAAAGAGTGTA
TGGGACATAGTAGTTATAAGAAAATAAAAGGAACAATAAGGCAGGTGAGATAG

Upstream 100 bases:

>100_bases
TGTACTAAAGGGCACTTGGAACAGACTTTTAATCTGTAATCCAGGTGCTTTTTACATACCTGTAAAAGTACAGGAGATTA
TATCAAAAGGATGTGAGGAT

Downstream 100 bases:

>100_bases
TTGGGGATAAAAAGGCCTGCTAAACCAATTACTAGTACAACTAAAGTATTAGATATACAAGACTATCTCAGATACAAAAA
TGAAAGAGATTATGTATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MLSMYTSYICIYCKKEFVLLTEELQNTKGYLVCPYCSSRKVKKEKITDSLKECMGHSSYKKIKGTIRQVR

Sequences:

>Translated_70_residues
MLSMYTSYICIYCKKEFVLLTEELQNTKGYLVCPYCSSRKVKKEKITDSLKECMGHSSYKKIKGTIRQVR
>Mature_70_residues
MLSMYTSYICIYCKKEFVLLTEELQNTKGYLVCPYCSSRKVKKEKITDSLKECMGHSSYKKIKGTIRQVR

Specific function: Unknown

COG id: COG1996

COG function: function code K; DNA-directed RNA polymerase, subunit RPC10 (contains C4-type Zn-finger)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8225; Mature: 8225

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
11.4 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
11.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSMYTSYICIYCKKEFVLLTEELQNTKGYLVCPYCSSRKVKKEKITDSLKECMGHSSYK
CCCHHHHEEHEEECCCCEEEEHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHH
KIKGTIRQVR
HHHHHHHHCC
>Mature Secondary Structure
MLSMYTSYICIYCKKEFVLLTEELQNTKGYLVCPYCSSRKVKKEKITDSLKECMGHSSYK
CCCHHHHEEHEEECCCCEEEEHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCHHH
KIKGTIRQVR
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA