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The map label for this gene is cooS [H]

Identifier: 226948611

GI number: 226948611

Start: 1562299

End: 1564185

Strand: Direct

Name: cooS [H]

Synonym: CLM_1506

Alternate gene names: 226948611

Gene position: 1562299-1564185 (Clockwise)

Preceding gene: 226948610

Following gene: 226948612

Centisome position: 37.6

GC content: 33.17

Gene sequence:

>1887_bases
ATGTCAATGTGTACAAATTGTAAAACTTGCAAATCAGCAGATAAAGTTCTTCAAGGATTTATATCTAATATGGATATGGA
AACTTCTCATCATAGGGTAGAGGATCAAAAAATAAAATGTGGTTTTGGTCAGTTAGGTGTTTGTTGTAGACTTTGTGCAA
ATGGTCCTTGCAGAATAACTCCAAAATCACCAAGAGGTGTATGTGGTGCTAATGCAGATACTATAGTTGCAAGAAACTTT
TTAAGGGCAGTAGCAGCAGGAGCAGGATGTTATCTTCATATAGTAGAAAATACTGCAAGAAATTTAAAAGCTACAGGTGA
AAATAAAGGAAAGATAAAAGGAGAAAGAGCCTTAAATAGATTAGCAGAGATTTTTGAAATAAAAGAGGAAGATATATACG
AAAAAGCAGTTAAAGTGGCAGATATGGTTTTAAAGGATCTATATAAACCACGATATGAAAAGATGGAAATAGTAGAAAAA
ATGGCCTATAAACCAAGATATGAAAACTGGGAAAAGCTTAATATATTACCTGGTGGAGCTAAGTCAGAAGTTTTTGATGC
TGTAGTAAAAACTTCCACAAATCTAAACAGTGATCCTGTAGAAATGCTATTACACTGTTTAAACCTAGGTATATCTACAG
GTCTTTATGGATTAACATTAACAAATTTATTGAATGATGTAATGCTTGGAGAGCCAGTTATAAGGCCTGCCAAAGTTGGA
TTTAGGGTTATAGATGAAAGTTATATAAATATCATGATAACAGGTCATCAACATTCAACTATAGCACACCTTCAAGATAG
ATTGGTAGAAGAAGATGTAGTAGAAATGGCTAAAAAAGTTGGAGCTAAGGGTTTTAGATTAGTTGGATGTACCTGTGTGG
GACAAGATTTACAATTAAGAGGAGAACATTATAAAGAGGTATTCTCAGGCCATGGTGGAAATAATTTCACAAGTGAAGCT
ATAATTGCTACAGGAGCAATAGATGCTATAGTATCAGAATTTAATTGCACATTACCAGGTATAGAACCTATTACAGAAAA
TTTAAAAGTAAAAATGATTTGTCTAGATGATGTAGCTAAAAAATCTAATGCAGAATATTTAGAGTATTCTTATGAAGATA
GAGAAAAAATCAGTGAACATATTATAAAAGAAGCGTTAGATGCATATAAAGAAAGAAGACAAAATATCAAAGTAAACATA
CCTAGAGATCACGGTTATAATGATGTTATAACAGGAGTAAGCGAAGTTTCTCTTAAAGAATTTTTAGGTGGAACTTGGAA
GCCACTATTAGATTTAATAGCAGAAGGGAAAATAAAAGGAGTAGCTGGAGTTGTTGGATGTTCTAACTTAACAGCTATGG
GACATGATGTATTTACAGTAGAGTTAACAAAAGAACTTATAAAAAGAGATATAATAGTTCTTTCAGCAGGATGTTCTAGC
GGTGGACTTGAAAATGTAGGCTTAATGTCAACTTCAGCAGCTTCTCTTGCAGGAGACAATTTAAGAGCAGTATGTGAAAG
CTTGAAGATTCCACCAGTACTTAATTTTGGACCATGTCTTGCTATAGGAAGACTTGAAATTGTAGCTACAGAATTAGCTA
AAGATCTTGGTATAGATTTACCACAGCTTCCATTAGTTCTTTCAGCACCACAATGGTTAGAAGAACAAGCTTTAGCAGAT
GGAGCATTTGGATTAGCTTTAGGATTACCATTACATCTTGCTATATCACCATTCATAGGAGGAAGTAAGGTAGTATCCAA
AGTATTAACAGAAGATCTTAAGACTTTAACTGGAGGACAATTAATAATAGAAGATGATGTAAAAAAAGCTGCAGATAAAC
TAGAGGCTATAGTTTTAGATAGAAGAAAAAAACTCGGACTTAAATAG

Upstream 100 bases:

>100_bases
CATATAAATAAACATATGAAAATAGAGGAATTAAATATATTCCTTTTATTAACAAATAAAACTATACCAAATAGGTAGAT
ATTATAAAGGAGGATGGATT

Downstream 100 bases:

>100_bases
TTATTTTGATAATTACATTTTTGCATTGATCTGAAATTTAAACTAAATATTATTTTAGATCAATGTAAAAATATTAACTA
TAGAATTAAATTAAAATTAG

Product: carbon monoxide dehydrogenase

Products: NA

Alternate protein names: CODH [H]

Number of amino acids: Translated: 628; Mature: 627

Protein sequence:

>628_residues
MSMCTNCKTCKSADKVLQGFISNMDMETSHHRVEDQKIKCGFGQLGVCCRLCANGPCRITPKSPRGVCGANADTIVARNF
LRAVAAGAGCYLHIVENTARNLKATGENKGKIKGERALNRLAEIFEIKEEDIYEKAVKVADMVLKDLYKPRYEKMEIVEK
MAYKPRYENWEKLNILPGGAKSEVFDAVVKTSTNLNSDPVEMLLHCLNLGISTGLYGLTLTNLLNDVMLGEPVIRPAKVG
FRVIDESYINIMITGHQHSTIAHLQDRLVEEDVVEMAKKVGAKGFRLVGCTCVGQDLQLRGEHYKEVFSGHGGNNFTSEA
IIATGAIDAIVSEFNCTLPGIEPITENLKVKMICLDDVAKKSNAEYLEYSYEDREKISEHIIKEALDAYKERRQNIKVNI
PRDHGYNDVITGVSEVSLKEFLGGTWKPLLDLIAEGKIKGVAGVVGCSNLTAMGHDVFTVELTKELIKRDIIVLSAGCSS
GGLENVGLMSTSAASLAGDNLRAVCESLKIPPVLNFGPCLAIGRLEIVATELAKDLGIDLPQLPLVLSAPQWLEEQALAD
GAFGLALGLPLHLAISPFIGGSKVVSKVLTEDLKTLTGGQLIIEDDVKKAADKLEAIVLDRRKKLGLK

Sequences:

>Translated_628_residues
MSMCTNCKTCKSADKVLQGFISNMDMETSHHRVEDQKIKCGFGQLGVCCRLCANGPCRITPKSPRGVCGANADTIVARNF
LRAVAAGAGCYLHIVENTARNLKATGENKGKIKGERALNRLAEIFEIKEEDIYEKAVKVADMVLKDLYKPRYEKMEIVEK
MAYKPRYENWEKLNILPGGAKSEVFDAVVKTSTNLNSDPVEMLLHCLNLGISTGLYGLTLTNLLNDVMLGEPVIRPAKVG
FRVIDESYINIMITGHQHSTIAHLQDRLVEEDVVEMAKKVGAKGFRLVGCTCVGQDLQLRGEHYKEVFSGHGGNNFTSEA
IIATGAIDAIVSEFNCTLPGIEPITENLKVKMICLDDVAKKSNAEYLEYSYEDREKISEHIIKEALDAYKERRQNIKVNI
PRDHGYNDVITGVSEVSLKEFLGGTWKPLLDLIAEGKIKGVAGVVGCSNLTAMGHDVFTVELTKELIKRDIIVLSAGCSS
GGLENVGLMSTSAASLAGDNLRAVCESLKIPPVLNFGPCLAIGRLEIVATELAKDLGIDLPQLPLVLSAPQWLEEQALAD
GAFGLALGLPLHLAISPFIGGSKVVSKVLTEDLKTLTGGQLIIEDDVKKAADKLEAIVLDRRKKLGLK
>Mature_627_residues
SMCTNCKTCKSADKVLQGFISNMDMETSHHRVEDQKIKCGFGQLGVCCRLCANGPCRITPKSPRGVCGANADTIVARNFL
RAVAAGAGCYLHIVENTARNLKATGENKGKIKGERALNRLAEIFEIKEEDIYEKAVKVADMVLKDLYKPRYEKMEIVEKM
AYKPRYENWEKLNILPGGAKSEVFDAVVKTSTNLNSDPVEMLLHCLNLGISTGLYGLTLTNLLNDVMLGEPVIRPAKVGF
RVIDESYINIMITGHQHSTIAHLQDRLVEEDVVEMAKKVGAKGFRLVGCTCVGQDLQLRGEHYKEVFSGHGGNNFTSEAI
IATGAIDAIVSEFNCTLPGIEPITENLKVKMICLDDVAKKSNAEYLEYSYEDREKISEHIIKEALDAYKERRQNIKVNIP
RDHGYNDVITGVSEVSLKEFLGGTWKPLLDLIAEGKIKGVAGVVGCSNLTAMGHDVFTVELTKELIKRDIIVLSAGCSSG
GLENVGLMSTSAASLAGDNLRAVCESLKIPPVLNFGPCLAIGRLEIVATELAKDLGIDLPQLPLVLSAPQWLEEQALADG
AFGLALGLPLHLAISPFIGGSKVVSKVLTEDLKTLTGGQLIIEDDVKKAADKLEAIVLDRRKKLGLK

Specific function: Unknown

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 68408; Mature: 68277

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMCTNCKTCKSADKVLQGFISNMDMETSHHRVEDQKIKCGFGQLGVCCRLCANGPCRIT
CCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCHHHHHHHHHCCCCEEEC
PKSPRGVCGANADTIVARNFLRAVAAGAGCYLHIVENTARNLKATGENKGKIKGERALNR
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHH
LAEIFEIKEEDIYEKAVKVADMVLKDLYKPRYEKMEIVEKMAYKPRYENWEKLNILPGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
KSEVFDAVVKTSTNLNSDPVEMLLHCLNLGISTGLYGLTLTNLLNDVMLGEPVIRPAKVG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
FRVIDESYINIMITGHQHSTIAHLQDRLVEEDVVEMAKKVGAKGFRLVGCTCVGQDLQLR
HEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHC
GEHYKEVFSGHGGNNFTSEAIIATGAIDAIVSEFNCTLPGIEPITENLKVKMICLDDVAK
CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEHHHHHC
KSNAEYLEYSYEDREKISEHIIKEALDAYKERRQNIKVNIPRDHGYNDVITGVSEVSLKE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCHHHHHHHH
FLGGTWKPLLDLIAEGKIKGVAGVVGCSNLTAMGHDVFTVELTKELIKRDIIVLSAGCSS
HHCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHCCCCEEEHHHHHHHHHCCEEEEECCCCC
GGLENVGLMSTSAASLAGDNLRAVCESLKIPPVLNFGPCLAIGRLEIVATELAKDLGIDL
CCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PQLPLVLSAPQWLEEQALADGAFGLALGLPLHLAISPFIGGSKVVSKVLTEDLKTLTGGQ
CCCCEEECCHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCE
LIIEDDVKKAADKLEAIVLDRRKKLGLK
EEEEHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SMCTNCKTCKSADKVLQGFISNMDMETSHHRVEDQKIKCGFGQLGVCCRLCANGPCRIT
CCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCEECCCCHHHHHHHHHCCCCEEEC
PKSPRGVCGANADTIVARNFLRAVAAGAGCYLHIVENTARNLKATGENKGKIKGERALNR
CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHHCCCCCCCCCCCCHHHHHHH
LAEIFEIKEEDIYEKAVKVADMVLKDLYKPRYEKMEIVEKMAYKPRYENWEKLNILPGGA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEECCCCC
KSEVFDAVVKTSTNLNSDPVEMLLHCLNLGISTGLYGLTLTNLLNDVMLGEPVIRPAKVG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
FRVIDESYINIMITGHQHSTIAHLQDRLVEEDVVEMAKKVGAKGFRLVGCTCVGQDLQLR
HEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHC
GEHYKEVFSGHGGNNFTSEAIIATGAIDAIVSEFNCTLPGIEPITENLKVKMICLDDVAK
CHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCEEEEEEHHHHHC
KSNAEYLEYSYEDREKISEHIIKEALDAYKERRQNIKVNIPRDHGYNDVITGVSEVSLKE
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCHHHHHHHH
FLGGTWKPLLDLIAEGKIKGVAGVVGCSNLTAMGHDVFTVELTKELIKRDIIVLSAGCSS
HHCCCHHHHHHHHHCCCCCCHHHHHCCCCHHHCCCCEEEHHHHHHHHHCCEEEEECCCCC
GGLENVGLMSTSAASLAGDNLRAVCESLKIPPVLNFGPCLAIGRLEIVATELAKDLGIDL
CCCCCCCCCCCCHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
PQLPLVLSAPQWLEEQALADGAFGLALGLPLHLAISPFIGGSKVVSKVLTEDLKTLTGGQ
CCCCEEECCHHHHHHHHHHCCCHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHCCCE
LIIEDDVKKAADKLEAIVLDRRKKLGLK
EEEEHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087; 11841199 [H]