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The map label for this gene is 226948457

Identifier: 226948457

GI number: 226948457

Start: 1400768

End: 1401511

Strand: Direct

Name: 226948457

Synonym: CLM_1342

Alternate gene names: NA

Gene position: 1400768-1401511 (Clockwise)

Preceding gene: 226948456

Following gene: 226948458

Centisome position: 33.71

GC content: 25.67

Gene sequence:

>744_bases
ATGCTTAGGGTCTTAAAAAATGAAATTATAAAAATGTTTAGTGGGAAAAAGTTTTATGTATTATCAATGACTTTAATTAT
AAGTATAATTGTTATGGCTTTTTTAGGTAAAATTCATCCTAATAGAGGAATGAACACAAGTAATTTTGTATTTTACACTC
TTTTAGGAACGTTACTTAAACCATTAATTCCAATGTTTATGGTGCTTGTAATAACTGATACATTCACAGAAGATTATATA
CAAGGAACTATGAAGTTTTCATTAATGGCACCTATTAAAAAAATTGATCTTATAATTGGAAAGTTTTTGTTTATAGCTAT
ATATGGGTTAATATTATTAGCTATAGGTTTTGTTGGAAGTTATATTATTGGAGTTATAACTTTTGGGGTTGGTAATAATG
GAGAATTTTTAAATGGATTTATTAATAATATAAAAGTTTATGCTAGTATAATATTACCTCTTTTCTCATTTAGTGCAGTT
ATAAGTTTTATTGCAGTAATTATTAATAATAGTGGTGCAATGATAGGATTAGGAATTGGAATTGATGTTATTATGATGAT
GATAGATTCTCAGATGAAAAATATAATGTATTATACATTTTCTGGAGGAATGTATGCTTATAGGATTGTCCAAAATTTAA
ATGCCCGTAACATTCTAATGCTTTCACTTACTGCATGTATATATATAACTGTTTTCCTAATACTTAGTATAGTTGTGGTT
AAAAGGAAGGATATAGTGTTATAA

Upstream 100 bases:

>100_bases
AAGATTTTAATTTCTAATGGTGTTAATGTTGAAAATATATACTGTAAAAAAAATTCTTTAGAGGATTATTTCTTCAATGT
AATGGAAGGAGATAATGAAT

Downstream 100 bases:

>100_bases
AGTTCAATAGGAAATATATTTTGGTTTAGAGATATTGGTTTTTAATGAAATATGTTAAGAAGAAAAAGTGCTAATTTTGT
GAGGATGGAGCACTTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MLRVLKNEIIKMFSGKKFYVLSMTLIISIIVMAFLGKIHPNRGMNTSNFVFYTLLGTLLKPLIPMFMVLVITDTFTEDYI
QGTMKFSLMAPIKKIDLIIGKFLFIAIYGLILLAIGFVGSYIIGVITFGVGNNGEFLNGFINNIKVYASIILPLFSFSAV
ISFIAVIINNSGAMIGLGIGIDVIMMMIDSQMKNIMYYTFSGGMYAYRIVQNLNARNILMLSLTACIYITVFLILSIVVV
KRKDIVL

Sequences:

>Translated_247_residues
MLRVLKNEIIKMFSGKKFYVLSMTLIISIIVMAFLGKIHPNRGMNTSNFVFYTLLGTLLKPLIPMFMVLVITDTFTEDYI
QGTMKFSLMAPIKKIDLIIGKFLFIAIYGLILLAIGFVGSYIIGVITFGVGNNGEFLNGFINNIKVYASIILPLFSFSAV
ISFIAVIINNSGAMIGLGIGIDVIMMMIDSQMKNIMYYTFSGGMYAYRIVQNLNARNILMLSLTACIYITVFLILSIVVV
KRKDIVL
>Mature_247_residues
MLRVLKNEIIKMFSGKKFYVLSMTLIISIIVMAFLGKIHPNRGMNTSNFVFYTLLGTLLKPLIPMFMVLVITDTFTEDYI
QGTMKFSLMAPIKKIDLIIGKFLFIAIYGLILLAIGFVGSYIIGVITFGVGNNGEFLNGFINNIKVYASIILPLFSFSAV
ISFIAVIINNSGAMIGLGIGIDVIMMMIDSQMKNIMYYTFSGGMYAYRIVQNLNARNILMLSLTACIYITVFLILSIVVV
KRKDIVL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27562; Mature: 27562

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
6.9 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRVLKNEIIKMFSGKKFYVLSMTLIISIIVMAFLGKIHPNRGMNTSNFVFYTLLGTLLK
CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
PLIPMFMVLVITDTFTEDYIQGTMKFSLMAPIKKIDLIIGKFLFIAIYGLILLAIGFVGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIIGVITFGVGNNGEFLNGFINNIKVYASIILPLFSFSAVISFIAVIINNSGAMIGLGIG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
IDVIMMMIDSQMKNIMYYTFSGGMYAYRIVQNLNARNILMLSLTACIYITVFLILSIVVV
HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRKDIVL
HHHCCCC
>Mature Secondary Structure
MLRVLKNEIIKMFSGKKFYVLSMTLIISIIVMAFLGKIHPNRGMNTSNFVFYTLLGTLLK
CHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
PLIPMFMVLVITDTFTEDYIQGTMKFSLMAPIKKIDLIIGKFLFIAIYGLILLAIGFVGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIIGVITFGVGNNGEFLNGFINNIKVYASIILPLFSFSAVISFIAVIINNSGAMIGLGIG
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
IDVIMMMIDSQMKNIMYYTFSGGMYAYRIVQNLNARNILMLSLTACIYITVFLILSIVVV
HHHHHHHHHHHHHHEEEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KRKDIVL
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA