Click here to switch to the map view.

The map label for this gene is 226947897

Identifier: 226947897

GI number: 226947897

Start: 807411

End: 808601

Strand: Reverse

Name: 226947897

Synonym: CLM_0753

Alternate gene names: NA

Gene position: 808601-807411 (Counterclockwise)

Preceding gene: 226947903

Following gene: 226947891

Centisome position: 19.46

GC content: 32.07

Gene sequence:

>1191_bases
TTGGAAAGAGTAGTTGGAACTGTTGTTAGAGGTCTTCGTTGCCCTATTATTAACGAAGGAGATTGTATAGAAGATATCGT
TGTTGATAGCGTATTAAAGGCTTCTAAAGTTGAAGGATTTGAAATAAATGATAAAGATGTTGTTACTGTAACAGAATCTA
TTGTTGCTCGTGCCCAAGGTAACTATGCTACAATAGATCAAATTGCAAAGGATGTAAAATCAAAATTTGGTGATGATACT
ATAGGAGTAATATTCCCAATACTAAGCCGTAACCGTTTTGCTATATGCCTTCGTGGTATTGCAAAGGGTGCTAAAAAAAT
TGTTCTTATGCTTAGCTATCCATCTGATGAAGTTGGTAATCATCTTGTTGATATAGACATGTTAGATGAAAAAGGAATAA
ATCCTTGGAGTGATGTTTTAACTGAAAAACAATTCCGTGATTGTTTTGGAGAAGTTAAACATACATTTACTGGAGTTGAT
TACGTTGAATACTATAAATCTTTAATTGAAGAATATGGCGTTGAATGTGAAGTTATATTCTCAAATAATCCAAAGACTAT
ATTAAACTACACAAAGAACGTTCTTACTTGTGATATACATACAAGATTTAGAACTAAAAAAATACTTAAAAACAATGGTG
GAGAAAAAATATACAGCCTTGATAATATATTATCTTCATCTGTTGATGGTGGTGGTTTTAATGAAAACTATGGTCTTTTA
GGTTCAAATAAATCTACTGAAGACACAGTTAAATTATTCCCTCGTAACTGCAAACCTGTTGTAGATAATATACAAGCTAA
ACTTAAAGAAAAAACAGGTAAAAATGTTGAAGTTATGATTTATGGAGACGGAGCATTCAAAGATCCTGTAGGTAAGATAT
GGGAACTTGCTGACCCAGTAGTTTCACCTGCTTATACAAAAGGACTTGAAGGAACTCCAAACGAAGTTAAACTAAAATAC
CTTGCTGACAATGACTTTGCTCATTTAAAAGGTGATGAACTTAAAAAAGCTATATCTGAATATATAAAAAATAAAGAAGA
TGATCTTGTAGGTTCTATGGCTTCTCAAGGAACTACACCAAGAAGACTTACAGATCTTATAGGTTCACTTTCTGACCTAA
CCTCTGGAAGTGGAGATAAAGGTACTCCTATAATATTTATACAAGGTTATTTTGACAACTATACTAAATAA

Upstream 100 bases:

>100_bases
ATATACTATTTATTTTACTTATACCATAAAAATGTTGTATATTACAAGTATAGGAAGTAATTTTAATTCAAAATTTTTTT
GAAATTAAGGAGAGATAAAT

Downstream 100 bases:

>100_bases
AAACCTATGAAAAATAAATTTCTATATTTAATGTTTAAAACAAACAGCCTAGAATTAAGGAATTATAAAGCCTCATGCAA
ATGCATGAGGCTTTTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MERVVGTVVRGLRCPIINEGDCIEDIVVDSVLKASKVEGFEINDKDVVTVTESIVARAQGNYATIDQIAKDVKSKFGDDT
IGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVD
YVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL
GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKY
LADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK

Sequences:

>Translated_396_residues
MERVVGTVVRGLRCPIINEGDCIEDIVVDSVLKASKVEGFEINDKDVVTVTESIVARAQGNYATIDQIAKDVKSKFGDDT
IGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVD
YVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL
GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKY
LADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK
>Mature_396_residues
MERVVGTVVRGLRCPIINEGDCIEDIVVDSVLKASKVEGFEINDKDVVTVTESIVARAQGNYATIDQIAKDVKSKFGDDT
IGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVD
YVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL
GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPAYTKGLEGTPNEVKLKY
LADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43820; Mature: 43820

Theoretical pI: Translated: 5.12; Mature: 5.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVVGTVVRGLRCPIINEGDCIEDIVVDSVLKASKVEGFEINDKDVVTVTESIVARAQG
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCC
NYATIDQIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGN
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHCC
HLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVDYVEYYKSLIEEYGVECEVIF
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE
SNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL
CCCCHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC
GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPV
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCHH
VSPAYTKGLEGTPNEVKLKYLADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTP
CCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH
RRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK
HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MERVVGTVVRGLRCPIINEGDCIEDIVVDSVLKASKVEGFEINDKDVVTVTESIVARAQG
CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHCCC
NYATIDQIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGN
CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHCC
HLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVDYVEYYKSLIEEYGVECEVIF
EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE
SNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL
CCCCHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC
GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPV
CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCHH
VSPAYTKGLEGTPNEVKLKYLADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTP
CCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH
RRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK
HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA