Click here to switch to the map view.

The map label for this gene is 226947321

Identifier: 226947321

GI number: 226947321

Start: 121250

End: 121888

Strand: Reverse

Name: 226947321

Synonym: CLM_0141

Alternate gene names: NA

Gene position: 121888-121250 (Counterclockwise)

Preceding gene: 226947331

Following gene: 226947320

Centisome position: 2.93

GC content: 25.04

Gene sequence:

>639_bases
ATGAAAATTAAGTGGCTAGGTCATTCTTGTTTTATCTTAGAAAGTGATACTAAAACAACTATAATAACAGACCCTTATGA
GCCTAGTATAGGTATTCATAGAATGGACTATGCTTCAGATATATGCACTATAAGTCATAATCATTTTGATCATAATTTTA
AGGATGAGCTAAATAAAAATTGTATAATTATAGATACTCCCATCGAATATAAATATGAAGACTTGAAAATAAAAGGATTT
AAAAGTTATCATGATAAACTAAATGGACTTAAAAGAGGGAGTAATATAATATTTAAATTTAATATTGATGGTTTTAATAT
ATGTCATTTAGGTGATTTAGGACATCTATTACCAAAAAACTTTATTTATAATTTAGGTCCTATAGATGTATTATTGGTAC
CTATTGGAGGGAATTATACACTTAACGGCAAGGAAGCTGCTGCATTATGCAAAAATTTAAATAGCCATATAGTAATTCCA
ATGCATTTCGGATTGAATAATATAAAGATTAAACTAGATGGTATAGAAGATTTTTTAATTCATATGGATAAAAACTTAGA
AATAGGATCTAATATCATAACATTAGAAAACAATATAAAGAATTATAATAATATGGTTTATATACTTAATATGATTTAG

Upstream 100 bases:

>100_bases
ATTTATAAAAAATTAAAAATATTATAATTAATTTTGAATACAATCTATTTATTTACTAAAACTAACTTTAAAATATTTTA
TTTATATTTAGGAGGTAAAA

Downstream 100 bases:

>100_bases
CTATTTATAATAAAATAGCTATTTTTTATTATTTTAAAAGAATTATTTACAACAGAACTACCTTGTGCTACAATGTAGCT
ACAGTACCTTGTTAAGCATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTISHNHFDHNFKDELNKNCIIIDTPIEYKYEDLKIKGF
KSYHDKLNGLKRGSNIIFKFNIDGFNICHLGDLGHLLPKNFIYNLGPIDVLLVPIGGNYTLNGKEAAALCKNLNSHIVIP
MHFGLNNIKIKLDGIEDFLIHMDKNLEIGSNIITLENNIKNYNNMVYILNMI

Sequences:

>Translated_212_residues
MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTISHNHFDHNFKDELNKNCIIIDTPIEYKYEDLKIKGF
KSYHDKLNGLKRGSNIIFKFNIDGFNICHLGDLGHLLPKNFIYNLGPIDVLLVPIGGNYTLNGKEAAALCKNLNSHIVIP
MHFGLNNIKIKLDGIEDFLIHMDKNLEIGSNIITLENNIKNYNNMVYILNMI
>Mature_212_residues
MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTISHNHFDHNFKDELNKNCIIIDTPIEYKYEDLKIKGF
KSYHDKLNGLKRGSNIIFKFNIDGFNICHLGDLGHLLPKNFIYNLGPIDVLLVPIGGNYTLNGKEAAALCKNLNSHIVIP
MHFGLNNIKIKLDGIEDFLIHMDKNLEIGSNIITLENNIKNYNNMVYILNMI

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR022877 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 24250; Mature: 24250

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTISHNHFDHNFKDELNKN
CEEEEECCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHCCC
CIIIDTPIEYKYEDLKIKGFKSYHDKLNGLKRGSNIIFKFNIDGFNICHLGDLGHLLPKN
EEEEECCCCEEEEEEEEECCHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCHHHCCHH
FIYNLGPIDVLLVPIGGNYTLNGKEAAALCKNLNSHIVIPMHFGLNNIKIKLDGIEDFLI
HEECCCCEEEEEEECCCCEEECCHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCEEEEE
HMDKNLEIGSNIITLENNIKNYNNMVYILNMI
EECCCCCCCCEEEEEECCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKIKWLGHSCFILESDTKTTIITDPYEPSIGIHRMDYASDICTISHNHFDHNFKDELNKN
CEEEEECCEEEEEECCCCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCCCHHHHCCC
CIIIDTPIEYKYEDLKIKGFKSYHDKLNGLKRGSNIIFKFNIDGFNICHLGDLGHLLPKN
EEEEECCCCEEEEEEEEECCHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCHHHCCHH
FIYNLGPIDVLLVPIGGNYTLNGKEAAALCKNLNSHIVIPMHFGLNNIKIKLDGIEDFLI
HEECCCCEEEEEEECCCCEEECCHHHHHHHHCCCCCEEEEEEECCCEEEEEEECCEEEEE
HMDKNLEIGSNIITLENNIKNYNNMVYILNMI
EECCCCCCCCEEEEEECCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11121031 [H]