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The map label for this gene is yizB [H]

Identifier: 226947320

GI number: 226947320

Start: 120792

End: 121130

Strand: Reverse

Name: yizB [H]

Synonym: CLM_0140

Alternate gene names: 226947320

Gene position: 121130-120792 (Counterclockwise)

Preceding gene: 226947321

Following gene: 226947319

Centisome position: 2.92

GC content: 26.84

Gene sequence:

>339_bases
TTGAATGATAAATCCCAACTTTTAAGAGGAACCTTAGAAGGATGTATTCTTAAAATAATAAATGATAAAGAAACCTATGG
CTATGAAATAGCTGAAAATCTTAAACTATATGGATTTAAAGACATAAGTGAAGGCACAATTTATCCACTGCTTATAAGAT
TAGAAAAAAATAATTTCTTAAACTCTACAAAAAAACCCTCTCCTTATGGTCCTAAAAGAAAATATTATACCCTTTCAGAA
AAGGGTGTAGAAGAATTGAATTATTTTTACACTAATTGGTTGGAACTTAAAAATAGTGTAGATAAAATATTTTTAAATTA
TTCAAAGGGGGAAGCTTAA

Upstream 100 bases:

>100_bases
TATTTTTTATTATTTTAAAAGAATTATTTACAACAGAACTACCTTGTGCTACAATGTAGCTACAGTACCTTGTTAAGCAT
AATAGTGAGGTGATTAAAAT

Downstream 100 bases:

>100_bases
AATGAATAATATTAAAGAATTAGTAAAATCAACCAATGAATTAAGTAAATCTTTGAATGATGCAAATGATGAAACTTTTA
CTAATATAACTTGTTATTTA

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEGTIYPLLIRLEKNNFLNSTKKPSPYGPKRKYYTLSE
KGVEELNYFYTNWLELKNSVDKIFLNYSKGEA

Sequences:

>Translated_112_residues
MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEGTIYPLLIRLEKNNFLNSTKKPSPYGPKRKYYTLSE
KGVEELNYFYTNWLELKNSVDKIFLNYSKGEA
>Mature_112_residues
MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEGTIYPLLIRLEKNNFLNSTKKPSPYGPKRKYYTLSE
KGVEELNYFYTNWLELKNSVDKIFLNYSKGEA

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR [H]

EC number: NA

Molecular weight: Translated: 13076; Mature: 13076

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEGTIYPLLIRLEKNNFL
CCCHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEEECCCCCCCCCEEEEEEEEECCCCC
NSTKKPSPYGPKRKYYTLSEKGVEELNYFYTNWLELKNSVDKIFLNYSKGEA
CCCCCCCCCCCCCEEEECCHHCHHHHHHHHHHHHHHHCCHHEEEEECCCCCC
>Mature Secondary Structure
MNDKSQLLRGTLEGCILKIINDKETYGYEIAENLKLYGFKDISEGTIYPLLIRLEKNNFL
CCCHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEEECCCCCCCCCEEEEEEEEECCCCC
NSTKKPSPYGPKRKYYTLSEKGVEELNYFYTNWLELKNSVDKIFLNYSKGEA
CCCCCCCCCCCCCEEEECCHHCHHHHHHHHHHHHHHHCCHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]