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The map label for this gene is abgB [H]

Identifier: 226947277

GI number: 226947277

Start: 79351

End: 80511

Strand: Reverse

Name: abgB [H]

Synonym: CLM_0094

Alternate gene names: 226947277

Gene position: 80511-79351 (Counterclockwise)

Preceding gene: 226947291

Following gene: 226947275

Centisome position: 1.94

GC content: 27.13

Gene sequence:

>1161_bases
ATGAAGCAAAAAATAGTATCCTACTTAAAGTCCATAGAATCAGATTTATTTAATATATCTAAATATCTTTATGATAATCC
CGAAACAAGTTTTAATGAATATAAATCTTGTAAATATTTAATAGATATCTTAAAGAAAAATAATTTTAATGTTCAAGAAA
ACTATTATAATATACCTACATCATTTTATGCAGAATTTGGTAAAGGGTACCCTAAAATATGTTTTTTTTGTGAATACGAT
GCCCCAAGTGAAATAGGCCATGTATCAGGGCATAACTTAGTTTCCTCCATATCCCTAGGAGCTGCTTTATCTCTTTCAAA
AGTAATAGATAATTTTTCTGGAACTATTATTGTAATGGGAACACCCGGTGAATCTCTAAGCGGTTCTAAAGTAACTTTAG
CTAAACAAGGAGCTTTTAAAGATATAGATGTAGGTCTTATGGTTCATCCTGATGAAGTAACCTGCCAAAGTGGATCTTCA
ATGGCCATTCTTCCCTTAAAAATAAAATTTAGAGGAAAGGAAACCTTAAGCTATGAAAATACTAATGTATTTTCATCATT
AAATGGTCTTTTATATACATTTAATTCTATAAATCTTTTAAAACAATCTATTAATAAAAACTTTCATGTAGATAAATTGG
TTATTAATAGTGGTAAAGATCCTTATATTTCTTCTAATACTACAGAAGCTAAATTTTATATAAGATCTAAAAGTATATCA
ACTGCTATTTATGTAGAAAAGCGAATAAGAAAAATAGTAGATAATGTTAACTCTCTTTTAAATTTAGATTCAGAAATTTG
TTTTTTTGAATTGCCTTATAGAGAATTAATAACCAATAAAAGGTTATCACGCTTGTTTTGCCATAATCTAAAGGAAGCTG
GTATAATTGATATTTGTAATGAAAAAAATACTGTATCAGGCTTAAGTTTAGGGACTGTAAGTCATTATACTCCTTGTATT
CATCCATATATATCTATATTGGACAAAAACAGCTCTGTAAATTATTTCACTAAAGAATTTGCAGATGAAACTTTAACAAA
GCATGCTCAACAAAATGCCCTTAAAGCTTCTCAAGCCTTAAGTTTAACTGCATTAGATCTAATTCAAAATGATATGCTTC
TAAAAGAAGTAAAAAAAGAATTTTTTAATAAAATAGAATAA

Upstream 100 bases:

>100_bases
AAATTTAATAATATTTATAACTTACATATAAAAATAATTTATTCTATTCATATTGGGTATAATAATATAACCTAGATGTT
TTAATTTGGAGGTTATATTT

Downstream 100 bases:

>100_bases
GAGACTAGCTAGCTAGTCTCTTATTTGATAAATACTTTATTTTTGTAATTAAATTATCGCTAGGTTCAAAATAAAATTTC
TTAGTACTATTCCCATCTTT

Product: amidohydrolase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILKKNNFNVQENYYNIPTSFYAEFGKGYPKICFFCEYD
APSEIGHVSGHNLVSSISLGAALSLSKVIDNFSGTIIVMGTPGESLSGSKVTLAKQGAFKDIDVGLMVHPDEVTCQSGSS
MAILPLKIKFRGKETLSYENTNVFSSLNGLLYTFNSINLLKQSINKNFHVDKLVINSGKDPYISSNTTEAKFYIRSKSIS
TAIYVEKRIRKIVDNVNSLLNLDSEICFFELPYRELITNKRLSRLFCHNLKEAGIIDICNEKNTVSGLSLGTVSHYTPCI
HPYISILDKNSSVNYFTKEFADETLTKHAQQNALKASQALSLTALDLIQNDMLLKEVKKEFFNKIE

Sequences:

>Translated_386_residues
MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILKKNNFNVQENYYNIPTSFYAEFGKGYPKICFFCEYD
APSEIGHVSGHNLVSSISLGAALSLSKVIDNFSGTIIVMGTPGESLSGSKVTLAKQGAFKDIDVGLMVHPDEVTCQSGSS
MAILPLKIKFRGKETLSYENTNVFSSLNGLLYTFNSINLLKQSINKNFHVDKLVINSGKDPYISSNTTEAKFYIRSKSIS
TAIYVEKRIRKIVDNVNSLLNLDSEICFFELPYRELITNKRLSRLFCHNLKEAGIIDICNEKNTVSGLSLGTVSHYTPCI
HPYISILDKNSSVNYFTKEFADETLTKHAQQNALKASQALSLTALDLIQNDMLLKEVKKEFFNKIE
>Mature_386_residues
MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILKKNNFNVQENYYNIPTSFYAEFGKGYPKICFFCEYD
APSEIGHVSGHNLVSSISLGAALSLSKVIDNFSGTIIVMGTPGESLSGSKVTLAKQGAFKDIDVGLMVHPDEVTCQSGSS
MAILPLKIKFRGKETLSYENTNVFSSLNGLLYTFNSINLLKQSINKNFHVDKLVINSGKDPYISSNTTEAKFYIRSKSIS
TAIYVEKRIRKIVDNVNSLLNLDSEICFFELPYRELITNKRLSRLFCHNLKEAGIIDICNEKNTVSGLSLGTVSHYTPCI
HPYISILDKNSSVNYFTKEFADETLTKHAQQNALKASQALSLTALDLIQNDMLLKEVKKEFFNKIE

Specific function: Required but not essential for aminobenzoyl-glutamate utilization. May participate in hydrolysis of aminobenzoyl- glutamate to aminobenzoate, either alone or in combination with AbgA [H]

COG id: COG1473

COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI58082085, Length=398, Percent_Identity=26.1306532663317, Blast_Score=149, Evalue=4e-36,
Organism=Escherichia coli, GI1787598, Length=326, Percent_Identity=25.7668711656442, Blast_Score=118, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017145
- InterPro:   IPR010168
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: NA

Molecular weight: Translated: 43467; Mature: 43467

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILKKNNFNVQENYYNIPT
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCH
SFYAEFGKGYPKICFFCEYDAPSEIGHVSGHNLVSSISLGAALSLSKVIDNFSGTIIVMG
HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
TPGESLSGSKVTLAKQGAFKDIDVGLMVHPDEVTCQSGSSMAILPLKIKFRGKETLSYEN
CCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEECCCCCEEEEEEEEEECCCCEECCCC
TNVFSSLNGLLYTFNSINLLKQSINKNFHVDKLVINSGKDPYISSNTTEAKFYIRSKSIS
CHHHHHHCCHHEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCC
TAIYVEKRIRKIVDNVNSLLNLDSEICFFELPYRELITNKRLSRLFCHNLKEAGIIDICN
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECC
EKNTVSGLSLGTVSHYTPCIHPYISILDKNSSVNYFTKEFADETLTKHAQQNALKASQAL
CCCCCCCEEECCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTALDLIQNDMLLKEVKKEFFNKIE
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQKIVSYLKSIESDLFNISKYLYDNPETSFNEYKSCKYLIDILKKNNFNVQENYYNIPT
CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCH
SFYAEFGKGYPKICFFCEYDAPSEIGHVSGHNLVSSISLGAALSLSKVIDNFSGTIIVMG
HHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
TPGESLSGSKVTLAKQGAFKDIDVGLMVHPDEVTCQSGSSMAILPLKIKFRGKETLSYEN
CCCCCCCCCEEEEEECCCCCCCCEEEEECCCCCEECCCCCEEEEEEEEEECCCCEECCCC
TNVFSSLNGLLYTFNSINLLKQSINKNFHVDKLVINSGKDPYISSNTTEAKFYIRSKSIS
CHHHHHHCCHHEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEEEECCCCC
TAIYVEKRIRKIVDNVNSLLNLDSEICFFELPYRELITNKRLSRLFCHNLKEAGIIDICN
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCEEEECC
EKNTVSGLSLGTVSHYTPCIHPYISILDKNSSVNYFTKEFADETLTKHAQQNALKASQAL
CCCCCCCEEECCHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
SLTALDLIQNDMLLKEVKKEFFNKIE
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 9829935 [H]