The gene/protein map for NC_012563 is currently unavailable.
Definition Clostridium botulinum A2 str. Kyoto chromosome, complete genome.
Accession NC_012563
Length 4,155,278

Click here to switch to the map view.

The map label for this gene is 226947263

Identifier: 226947263

GI number: 226947263

Start: 55200

End: 56642

Strand: Direct

Name: 226947263

Synonym: CLM_0064

Alternate gene names: NA

Gene position: 55200-56642 (Clockwise)

Preceding gene: 226947262

Following gene: 226947266

Centisome position: 1.33

GC content: 27.58

Gene sequence:

>1443_bases
ATGAAGGGTAATAAAAAGATTAATTTACAAGAAAAAGAATTATATAAGTTATTTAACGAAATAAAATTTGAAGAAAGTGA
GTTAAATAATATGGAGGAAGAAGTAGATATTATTCAAAAGGAGAGAATAAAGAAAAATTTAAATAATAAAATAAAGAGAA
AAAATAGGTCTAACAAGCTAAAATATACTTCTATTGCCGCAGCTATAACATTAGTATTTTCAATAGGTATTGTTACTGCA
TCACCGACCTTTGCTAAAAATATTCCAGTTTTAAATTCTATAATGCAAACACTAAATAATAAATATGGCAATAGGGGTGA
TTATGCAAAATACTCTGAAATAATAAATAAATCAGTTTCAAACAATGGAATAACAATTACAATAAATGAAGTAATTGCAG
ATGACTCAAAATTAGTTATAAGTTATACATTAAAAACTAATAAAAAAATAAAAGATTTAGAAGTATTTGGTCTGGGGGGA
TTTTTAAAGATAGATGGTAAAACTTTTTCCTCAATGGGAACTTCTTTTGGCCAGTATATAGATGATTATACTTATATAGG
TAGTGAGGAAATTCACACTAGTATACCAGAAGATAAAAAATTTAATATTGATGTAAATATTACAGAGGTATCTGATATAA
AAGGCAAGTGGAATTTTGCTTTTAGTGCATCAAAAGAAGAAATTTCTAGGGAAAGTACTGTGTTTAGACCAAATCAAAAA
TTGGATTTGCCAGACAGTAATGTAGCTATCGATAAAGTAGTATTTTCACCTATAGATACCTCTATTTTCATAACTGGATA
TGGTAAGAATAAAAATATAAAAGCAGGACCTAATGGTGGTATGTTTGACTACAATTATTGGATTGCTTTTGATGATACTG
GTGTGGAACTTATACCAAAGGGCATTGGAGGGGGCGAATGTGACTTTAATAAAAATACATTTTCTTCTGAAATGCAATAT
GAAAAGTCTAAAAGTATTCCAAAATATTTAACTATTATTCCTTGCAAAATTACTCCTTCAGGGGGAGGTGGAGTGAAGAG
AGATGAGAATGGGAAAGAAATGCCAATTACTATACAAACCAAGAAACCTAAAGAAATAGGCAAAACTATAGATGGTGTAT
ATCCAATAGAGCTTTCTCAAGGTAAAATGGGAAAACTTATAATAAATGATATAAAGACAGAAAATAATAAAACCATAGTT
AAATATACAGCTAAAGGAATGGCACCTTACTTTCAAGCGCAAGATCTTCTTATAAAAGATGATAAAGGAAAATGTATTGA
AATTAAAGATTATATTAGAAGAGCAGATGATCAAAATCCTAATGAATTTACAAAGATATTTGAAGCATTAGATCCTAATA
AAAAATATACTATATTTACAAATAACTTTGATAATGTAGAATTTAGAGAGGATCTAAAATTTAAGATTGAGCTTAATAAA
TAA

Upstream 100 bases:

>100_bases
CTAAGATTTTGGGAGTGAATAGAAATTTAATAGATAAAAGGCTTTCAAGGGGACGTAAATTTTTGAGGGAAAAACTTATA
CTTTTGAAAGGAGAAATATT

Downstream 100 bases:

>100_bases
ATAGAAGAAATAAATCCCTAGAATATTAATAAATTAGGGATTTATTTTTTTAGCTATTTATATAATTAATGCTTTTATAC
TTTAGGGTTATTTAGTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 480; Mature: 480

Protein sequence:

>480_residues
MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKLKYTSIAAAITLVFSIGIVTA
SPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGG
FLKIDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFRPNQK
LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPKGIGGGECDFNKNTFSSEMQY
EKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQTKKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTIV
KYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK

Sequences:

>Translated_480_residues
MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKLKYTSIAAAITLVFSIGIVTA
SPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGG
FLKIDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFRPNQK
LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPKGIGGGECDFNKNTFSSEMQY
EKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQTKKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTIV
KYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK
>Mature_480_residues
MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKLKYTSIAAAITLVFSIGIVTA
SPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVSNNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGG
FLKIDGKTFSSMGTSFGQYIDDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFRPNQK
LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPKGIGGGECDFNKNTFSSEMQY
EKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQTKKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTIV
KYTAKGMAPYFQAQDLLIKDDKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54331; Mature: 54331

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKL
CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
KYTSIAAAITLVFSIGIVTASPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVS
EHHHHHHHHHHHHHHHHEECCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
NNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGGFLKIDGKTFSSMGTSFGQYI
CCCEEEEEHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHHH
DDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFRPNQK
CCCEECCCHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHHCCCCCEECCCCC
LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPK
CCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEC
GIGGGECDFNKNTFSSEMQYEKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQT
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEC
KKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTIVKYTAKGMAPYFQAQDLLIKD
CCCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEC
DKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK
CCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCEEEEEECC
>Mature Secondary Structure
MKGNKKINLQEKELYKLFNEIKFEESELNNMEEEVDIIQKERIKKNLNNKIKRKNRSNKL
CCCCCCCCCCHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
KYTSIAAAITLVFSIGIVTASPTFAKNIPVLNSIMQTLNNKYGNRGDYAKYSEIINKSVS
EHHHHHHHHHHHHHHHHEECCCHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
NNGITITINEVIADDSKLVISYTLKTNKKIKDLEVFGLGGFLKIDGKTFSSMGTSFGQYI
CCCEEEEEHHHCCCCCEEEEEEEECCCCCEEEEEEEECCCEEEECCCCHHHHHHHHHHHH
DDYTYIGSEEIHTSIPEDKKFNIDVNITEVSDIKGKWNFAFSASKEEISRESTVFRPNQK
CCCEECCCHHHHCCCCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHHCCCCCEECCCCC
LDLPDSNVAIDKVVFSPIDTSIFITGYGKNKNIKAGPNGGMFDYNYWIAFDDTGVELIPK
CCCCCCCEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEEEEEEEECCCCCEEEEC
GIGGGECDFNKNTFSSEMQYEKSKSIPKYLTIIPCKITPSGGGGVKRDENGKEMPITIQT
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCEEEEC
KKPKEIGKTIDGVYPIELSQGKMGKLIINDIKTENNKTIVKYTAKGMAPYFQAQDLLIKD
CCCHHHHHHHCCEEEEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCEEEEC
DKGKCIEIKDYIRRADDQNPNEFTKIFEALDPNKKYTIFTNNFDNVEFREDLKFKIELNK
CCCCEEEHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA