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The map label for this gene is yrxA [H]

Identifier: 226947231

GI number: 226947231

Start: 15092

End: 15613

Strand: Direct

Name: yrxA [H]

Synonym: CLM_0016

Alternate gene names: 226947231

Gene position: 15092-15613 (Clockwise)

Preceding gene: 226947230

Following gene: 226947232

Centisome position: 0.36

GC content: 25.1

Gene sequence:

>522_bases
ATGAATTCAATAGAAAGAAGAAAAAATATTGAAAATATGTTAATGAAAAATAATAAACCTATTAAAGGTAGTGAGATGGG
ACAAAAATTAGGTGTAACAAGGCAGGTTATAGTAAAAGATATAGCTATTTTAAGAGCTTCTGGTAAAAATATAATTGCTA
CACCTGAAGGCTATTTAATACCTAATGAAAATAAACAATTAATAAGGAAAATTATAGCTGTATGCCATGATAGTAAAGAT
ATAAAAGACGAATTAGAGGTTATAATTAAATTTGGAGGAATAGTAGAAGATGTTGTAGTAGAACATCCTATATATGGAGA
AATAAAAGCCATGTTGATGATAAAATCTATGTATGACATAGATAATTTTATAAAAAATATACAAAACAATAAGGCGGAAC
CGTTATTAATACTTACTGGTGGAATTCATTTGCATACAATATCTTCAGATAATGAAGATATAATGAATAAAATAATAGAA
GAATTAAACCAAAAAAATTATTTAGTAGATGAGGAAATATAA

Upstream 100 bases:

>100_bases
GTTATATTTAATTAAGAACCATCATAATGAAAATATTATAAATAAAGAGTTAAGCTTATTAATATATAGTGATAATTTAA
ATTAATAAGGTGGTGATATT

Downstream 100 bases:

>100_bases
AATGGATAAAGTAGCCCTTTTAAAATGTGATGAATATGATTTAGAAAAGGTAGAGAAAACTATAAGAAATGGATTTGAAC
TTTTAGGAGGAAACTCTTTT

Product: transcriptional regulator, biotin repressor family

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILRASGKNIIATPEGYLIPNENKQLIRKIIAVCHDSKD
IKDELEVIIKFGGIVEDVVVEHPIYGEIKAMLMIKSMYDIDNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIE
ELNQKNYLVDEEI

Sequences:

>Translated_173_residues
MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILRASGKNIIATPEGYLIPNENKQLIRKIIAVCHDSKD
IKDELEVIIKFGGIVEDVVVEHPIYGEIKAMLMIKSMYDIDNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIE
ELNQKNYLVDEEI
>Mature_173_residues
MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILRASGKNIIATPEGYLIPNENKQLIRKIIAVCHDSKD
IKDELEVIIKFGGIVEDVVVEHPIYGEIKAMLMIKSMYDIDNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIE
ELNQKNYLVDEEI

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19678; Mature: 19678

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILRASGKNIIATPEGYLI
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCEE
PNENKQLIRKIIAVCHDSKDIKDELEVIIKFGGIVEDVVVEHPIYGEIKAMLMIKSMYDI
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
DNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIEELNQKNYLVDEEI
HHHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNSIERRKNIENMLMKNNKPIKGSEMGQKLGVTRQVIVKDIAILRASGKNIIATPEGYLI
CCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCEE
PNENKQLIRKIIAVCHDSKDIKDELEVIIKFGGIVEDVVVEHPIYGEIKAMLMIKSMYDI
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHH
DNFIKNIQNNKAEPLLILTGGIHLHTISSDNEDIMNKIIEELNQKNYLVDEEI
HHHHHHHHCCCCCEEEEEECCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]