Click here to switch to the map view.

The map label for this gene is 226947232

Identifier: 226947232

GI number: 226947232

Start: 15615

End: 16778

Strand: Direct

Name: 226947232

Synonym: CLM_0017

Alternate gene names: NA

Gene position: 15615-16778 (Clockwise)

Preceding gene: 226947231

Following gene: 226947233

Centisome position: 0.38

GC content: 29.64

Gene sequence:

>1164_bases
ATGGATAAAGTAGCCCTTTTAAAATGTGATGAATATGATTTAGAAAAGGTAGAGAAAACTATAAGAAATGGATTTGAACT
TTTAGGAGGAAACTCTTTTTTGAATAAACTTATACCTTATAATAGTAAAGTTCTTTTAAAACCTAACATGCTTAGTATTG
AAAATGAAGGTTCTCCTGTGGTAACTAATAGTGTAGTTTTTGAAGCAGTAATAAGAATATTAAGAGATTATTCTAATAAC
ATATCCTTTGGAGATTCTCCTGGATTCGGAGATTCTAAAAAGGCAGCTGAAAAATCTGGATTACTTAATATAGCAAAGAA
ATATAATATAGAATTTAAAGATTTTAAAGAATCTATTAATGTAAGTTGTGATAATTCTATTTTATGCAGATCCTGGACTG
TAGCGAAGGCAGCTTATGAAACAGATGTACTAATAACATTACCTAAATTAAAGACACATGCTATGGCTTACTTTACAGGT
GCAGTTAAGAATCAGTTTGGATGTATACCAGGAACTTTAAAAGCTACTTGGCATACAAGAATGCCTAATGCAAATAATTT
CTGTAAAATGTTATTAGATCTAAATACATTGTTAGAAACTGATTTTGCTATACTAGATGGCATTATAGCTATGGAAGGAA
ATGGTCCTAAAAATGGAACTCCTTATAATCTTAATACAATTATAATGGGGGATAGCCTTACAGCGGTAGATTCCGTTGCT
GTTAAAATAATAGGATATGACAATCCATTAGATATACCTGTATTAAAAGAAGCTTATGATAGCAATTGGGGAAGTGTTTT
TTTAAAGGACATAGATATATTAGGTGAAAAAATAGATAGCATGGTCGTAGATAATTTTAAACTTTGTAGAGAGGGTGGGG
ATTTTTATTTTATAAATCCTAAAGTTACAAATTTTTTAAAGGATATTATTGCACCAGATCCTACTTTAATAGAAGAAAAG
TGTATAGGATGTAATAGATGTGCTGAAGTATGCCCTGAAAAACCATATGTTATAAATATGATAAAAAAAGGGGGTAAAAA
AATACCAGTTTGGAATATGAAAAAATGTATAAGATGTTTTTGTTGTCAGGAACTTTGTCCCAAAGGAGCTATAGAAACTA
AATATTCTTTTATTGGAAGATTTTTAAATAGAGATGGCAGGTGA

Upstream 100 bases:

>100_bases
ATTCATTTGCATACAATATCTTCAGATAATGAAGATATAATGAATAAAATAATAGAAGAATTAAACCAAAAAAATTATTT
AGTAGATGAGGAAATATAAA

Downstream 100 bases:

>100_bases
TAAAATGAAAAATAAAAAAGCATTGTTTATACCATTATTCATAATAATTTTATTTATAGCATTTTTTAATAAAATAATAA
ATTTTATTATTAATATAAAA

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNN
ISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTG
AVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA
VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIEEK
CIGCNRCAEVCPEKPYVINMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR

Sequences:

>Translated_387_residues
MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNN
ISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTG
AVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA
VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIEEK
CIGCNRCAEVCPEKPYVINMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR
>Mature_387_residues
MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPVVTNSVVFEAVIRILRDYSNN
ISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESINVSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTG
AVKNQFGCIPGTLKATWHTRMPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA
VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINPKVTNFLKDIIAPDPTLIEEK
CIGCNRCAEVCPEKPYVINMIKKGGKKIPVWNMKKCIRCFCCQELCPKGAIETKYSFIGRFLNRDGR

Specific function: Unknown

COG id: COG2006

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007160 [H]

Pfam domain/function: PF04015 DUF362 [H]

EC number: NA

Molecular weight: Translated: 43182; Mature: 43182

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPV
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCEEEECCCCCCE
VTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESIN
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC
VSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTR
CCCCCCEEECCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
MPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHEE
VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINP
EEEEECCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECH
KVTNFLKDIIAPDPTLIEEKCIGCNRCAEVCPEKPYVINMIKKGGKKIPVWNMKKCIRCF
HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCEEEHHHHCCCCCCCCCCHHHHHHHH
CCQELCPKGAIETKYSFIGRFLNRDGR
HHHHHCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDKVALLKCDEYDLEKVEKTIRNGFELLGGNSFLNKLIPYNSKVLLKPNMLSIENEGSPV
CCCEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECCCEEEECCCCCCE
VTNSVVFEAVIRILRDYSNNISFGDSPGFGDSKKAAEKSGLLNIAKKYNIEFKDFKESIN
EEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHCC
VSCDNSILCRSWTVAKAAYETDVLITLPKLKTHAMAYFTGAVKNQFGCIPGTLKATWHTR
CCCCCCEEECCCHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECC
MPNANNFCKMLLDLNTLLETDFAILDGIIAMEGNGPKNGTPYNLNTIIMGDSLTAVDSVA
CCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCCHHHHHEE
VKIIGYDNPLDIPVLKEAYDSNWGSVFLKDIDILGEKIDSMVVDNFKLCREGGDFYFINP
EEEEECCCCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECH
KVTNFLKDIIAPDPTLIEEKCIGCNRCAEVCPEKPYVINMIKKGGKKIPVWNMKKCIRCF
HHHHHHHHHHCCCCCHHHHHHCCHHHHHHHCCCCCEEEHHHHCCCCCCCCCCHHHHHHHH
CCQELCPKGAIETKYSFIGRFLNRDGR
HHHHHCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]