Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

Click here to switch to the map view.

The map label for this gene is clpC

Identifier: 226226990

GI number:

Start: 1898904

End: 1901411

Strand: Direct

Name: clpC

Synonym: GAU_1584

Alternate gene names: NA

Gene position: NA

Preceding gene: 226226989

Following gene: 226226991

Centisome position: NA

GC content: NA

Gene sequence:

>2508_bases
ATGAACGGCTACAACTTCACCGAGCGGGTGCGGAAGGTCCTGGCCATGGCGCGCGAAGAAGCGGCGCGCCTGCACCACGA
ATACGTGGGCACCGAGCATATCCTGCTGGGCCTCATCCGCGAGGGTGAGGGGGTTGCGGCAGCAGTGCTGCAGAACCTCA
ACGTCGATCTCGACGACGTCACGCTGAAAATCGAGGAGACGGTCAAGAAGGGGAAGGCGGCGCAGGCCACCGGCCCCGAT
TTGCCGTACACATCCCGCGCCAAGAAGGTGCTCGAGCTGGCCATGGCCGAGGCGCGCGATCTCAATCACAGCTACGTCGG
CACCGAACACCTGCTCCTGGGCCTGCTCCGTGAGGAGAAGGGCATTGCCGCGCAGGTGCTCACGGACGCCGGCGTGAATC
TCGAGGCCGCGCGCGCGGAAACGCTGCGCCTGCTGGGCACCGAGATGCCGCAGACCGGGGAGAAGCCGCAGGCCGAGAAG
GCTGGCACGGTTCCGCCGGCCGCTGCACCGGCCAAGGGCGACAAGAAGTCCAAGACGCCGGCGCTCGATCACTTCTGCCG
CGACCTGACGCAACTGGCAGCCGAAGGCCAGCTCGATCCGACGATTGGCCGCGCCAAGGAAATCGAGCGCGTCATGGAAG
TGCTGTCACGCCGCAAGAAGAACAACCCGGTGCTCATCGGCGAACCCGGTGTGGGCAAGACGGCCATCGTGGAAGGGCTG
GCACAGCTCATCTCGGCCAACGACTGCCCGGATTCGCTGCGCGACCATCGGGTGCTTTCACTCGATATGGCTGCGGTGAT
TGCCGGTACCAAGTACCGCGGTCAGTTCGAAGAGCGTCTCAAGGCGGTGATGAACGAGATCGCGCAGAACAAGCAGATCA
TTCTGTTCATCGACGAATTGCACACGCTGGTCGGCGCTGGTGCGGCCGAAGGCGCGATCGATGCGAGCAACATGCTGAAG
CCGGCGCTTGCGCGCGGTGAGCTGCAGTGTGTGGGCGCGTCGACGCTCAACGAATACCGCAAGTACATCGAGAAGGATGG
CGCGCTCGAGCGTCGTTTCCAGACCGTCGTGGTGGAACCGCCTTCAATCGACGAGACCGTGCAGATCCTGCAGGGGCTCA
AGAAGAAGTACGAAGACCATCACCGCGTGAACATCCCGGATGCGACGCTGCTGGCCGCTGCGAAGCTGTCCGAGCGGTAC
ATCACGGACCGCTTCCTGCCGGACAAGGCGATCGACGTGATCGACGAGGCGGGAGCACGGGCACGTCTGGCGGCGCAGGT
GCCGCCGGCCGAGGTGGCCGATCTCAAGGAACAGCTCGAGAAGATCAATACCGAGAAGGAAGCGGCGGTCCGCGATCAGA
ACTTCGAGCGCGCGGCGTCGCTGCGTGACAACGAACGCGAGTTGCAGGCCGAGATCCGGCGCAAGCAGGAAGAGTGGGAG
CAGCGGCGCCAGTCGTTCCGGCCCACGCTCGGCGAAGAGGAAATCGCGTTCATCGTCAGCCGCTGGACCGGTATCCCGGT
GACGCGCCTGCAGGAGGCGGAAACGTCACGCCTGCTGCGCATGGAGGACGAGTTGCACGGCACGGTGGTGGGGCAGGATG
AGGCCATCAAGGCACTCGCCCGCTCCATTCGTCGAAGCCGCGCTGGGCTCAAGGATCCGCGCCGTCCGATCGGCTCGTTC
ATCTTCTCGGGGCCCACGGGTGTCGGCAAGACCGAGCTGGCCCGTGCACTGGCCAAGTTCCTGTTCGCCGACACGTCAGC
GCTCATCCGCGTGGACATGAGCGAGTACATGGAGAAGTTCTCCGTCTCGCGACTCATCGGCGCGCCCCCGGGTTACGTGG
GGTATGAAGACTCTGGCACGTTGACCAAGGCAGTGCGGCGCAAGCCGTACAGCGTGGTCCTGCTCGACGAAATCGAGAAG
GCGCATCCGGATGTGTTCAACATCCTGCTGCAGGTGCTCGATGAAGGACATCTCACGGACAACTACGGCCGCGTGATCGA
CTTCAAGAACACCGTGGTCATCATGACCTCGAACGTCGGTGCCAAGGACATCACGAAGGGCAAGTCGCTGGGCTTCGCCA
CGAAGGATTCGCGCGGAGATTTCGAGCGGATTGCCGAAAAGGTGAAGGAGGAGATGGGCCGGGTCTTCAATCCGGAATTC
CTGAACCGCCTGGACGACGTGATCGTGTTCCACCCGCTGGGCAAGGAGCACATCGGACAGATCGTGTCCATTCTGTTCGG
CGACGTGCAGAAGCGCTTGGCTGAGGAGGAGCTCACGATCAAGCTGACGCCCGAGGCCACCGAGTTCCTGGTGGATCATG
GGCACGACGAGCACTTCGGTGCCCGTCCGCTCAAGAGGGCGATCCAGCGGTATGTGGAAGACCCGCTGTCTGAAAAGATC
CTGACGGGTGAGTATTCGCGTGGGGACGAAATCGAGGTGGGGGTGTCGACCACCGAGAAGGAAAAGCTGGAATTCCGCGT
CCTGACGCCCACCCCGCAGGCATCCTGA

Upstream 100 bases:

>100_bases
ACCGAGACGAACCTGGCCCGCGCGAAGTACGTGCGGCAGGTACTCATGAGCGAAGGCGGCGGCGTCGAATGACCCGCATC
TCAACGACCCTGAGGGGACG

Downstream 100 bases:

>100_bases
CCGGGCGCCTGGGCAGGGGGCTTCGGCTCAGTGCTCAGGCAACGGAGAAGGCGTGGGATGTGTCGAACGGCCGGACCCCA
TACGGGTTCGGCCGTTTGCC

Product: ATP-dependent Clp protease ATP-binding subunit ClpC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>835_residues
MNGYNFTERVRKVLAMAREEAARLHHEYVGTEHILLGLIREGEGVAAAVLQNLNVDLDDVTLKIEETVKKGKAAQATGPD
LPYTSRAKKVLELAMAEARDLNHSYVGTEHLLLGLLREEKGIAAQVLTDAGVNLEAARAETLRLLGTEMPQTGEKPQAEK
AGTVPPAAAPAKGDKKSKTPALDHFCRDLTQLAAEGQLDPTIGRAKEIERVMEVLSRRKKNNPVLIGEPGVGKTAIVEGL
AQLISANDCPDSLRDHRVLSLDMAAVIAGTKYRGQFEERLKAVMNEIAQNKQIILFIDELHTLVGAGAAEGAIDASNMLK
PALARGELQCVGASTLNEYRKYIEKDGALERRFQTVVVEPPSIDETVQILQGLKKKYEDHHRVNIPDATLLAAAKLSERY
ITDRFLPDKAIDVIDEAGARARLAAQVPPAEVADLKEQLEKINTEKEAAVRDQNFERAASLRDNERELQAEIRRKQEEWE
QRRQSFRPTLGEEEIAFIVSRWTGIPVTRLQEAETSRLLRMEDELHGTVVGQDEAIKALARSIRRSRAGLKDPRRPIGSF
IFSGPTGVGKTELARALAKFLFADTSALIRVDMSEYMEKFSVSRLIGAPPGYVGYEDSGTLTKAVRRKPYSVVLLDEIEK
AHPDVFNILLQVLDEGHLTDNYGRVIDFKNTVVIMTSNVGAKDITKGKSLGFATKDSRGDFERIAEKVKEEMGRVFNPEF
LNRLDDVIVFHPLGKEHIGQIVSILFGDVQKRLAEEELTIKLTPEATEFLVDHGHDEHFGARPLKRAIQRYVEDPLSEKI
LTGEYSRGDEIEVGVSTTEKEKLEFRVLTPTPQAS

Sequences:
NA

Specific function: NA

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA