Definition Gemmatimonas aurantiaca T-27, complete genome.
Accession NC_012489
Length 4,636,964

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Identifier: 226226991

GI number:

Start: 1901595

End: 1904048

Strand: Direct

Name: Not Available

Synonym: GAU_1585

Alternate gene names: NA

Gene position: NA

Preceding gene: 226226990

Following gene: 226226992

Centisome position: NA

GC content: NA

Gene sequence:

>2454_bases
ATGCTCAAACGCATTCCCCTAAAGCTGGTTTTTGCGGCTGCTGTGCTGGTGACCGGGCTCGCGCCGCGTGGTGTGCGCGC
GCAGCAGGAATCAGCGAGTCGCTGCATGACGCCCGATTCGATCGCGGTGCGCGGCAACGTGCGCGTCGCCGAATCCCGGA
TCCGTACGGAGGCCGGTCTGCAGGCGGGCGCGCCGCTGAATTTTCCGGCCCTTCAGCGCGTGCTGAAGGCGTTGTATCAG
TTGGGCGAATTCGATGATGCGCAGGTCGTCTGCGATCTTGAAACCGTGCCCGGCCGCGTGCTGTCCGTGCTTCAGGTGCG
TGAGCGTGCGGTGCTCGGCGACCTCAAGGTGGTGGGGCCCGATGCCGTGTCCGAGCGCTCGGTGAAGGACAAGATCGACC
TGCTGATTGGTCGTCCGATCGATCCGCTCCAGGTGGCGCGGGCGCGGGCGCGCATCGACTCGGTGTACGAGGCGGCCGGC
TATTATCTCGCACAGATTGCCATCGATTCCACCACGATGGACGATGGACGCATCGCGATCACCTACACGATCGACGAAGG
GCGCCGTCTTGCCATCTCCGGCATCGATGTGGAGAGCAAGGGCGAAGTGAGCGAGAAGCGCGTGGTTGGCGCGATGAAGA
CCAAGCCTGAAGGCTTCTGGTTCTGGCGCAAAGGTGAGTTCGACGAAAACAAGTTCGTCGGTGACCTCGGGGAGCGTATC
CCCGATCTCTATTCGCGCCTCGGCTATGTCGACATGCGGATCATCAAGGACACGCTCCTGGTGGATCGCGATCGTGGTAA
AGGGCTGGTGCAGATCGGTATCGAAGAAGGACCGCGTTTTCGTGTAGGGTCCTTCGAGATCGCCGGCAACCGCCGATTCC
CGACCGATGAGCTGCGCCGTTTCTATCCGTTCGACGGGCAGGACCCGACGCTGACGCAGCGCGTGAAGGGGCTCATCAAG
CGTGAAGCCGCGGCCCCCGAAGGCATCTTCGACCAGCACAAATGGGATGATGCCATCGAGAAGGTGAACAACGAGTACCG
CAACAACGGCTACCTGTACGCGCAGATCCGTCCCGTGATGGATCGTCAGTTCGTCGGCGAAGATTCGGTGCCCACGGTGA
ATCTCCGCTGGGAAATCGACGAACGAAATCCGGCCATCGTGAACCGCATCGAGATCATCGGCAATGATTTCACGGCTGAC
GATTGCATTCGTCGACAGATCTTCCTGGTGCCCGGTGGCCCGTTCAATCAGGCCGCGCTGATTCGCAGCTATCAGAGCAT
CAGCAACATGAATTTCTTCGAGTCCCCGATGCCGTTCCCGGACTACCGTCCGATCAACGAGCAGGGCGACGTCGATATCG
TGTTCCGCGTGAAGGAGAAGCGCACGGGCAGTGTGAACTTTGGCGCCTCGATGGGTCAGGGCGGCGTGGGCTTTGGTGGT
TTCATCGGGCTCGAGCAGCCCAACCTGTTTGGTCTGTGCAAGTCGGGCCGACTGAACTGGCAGTATGGTCGCTACTTCAA
CGACTTCACGGCCACCTATACCGATCCGGCGTTGCGTGGCTCCCGCCTGTCTGGCGCGGTGAGTGCCTACCGCACGCAGT
CGCGTTTCATCGTCGGTAACCTTGGCCAGAACATCCGCACGGGCGCGCAGTTCCGCCTGGGCATGCCGGTGCCGTGGTCG
CTCTTCTCCACGTTTGCGATGTCGTACAACGGCGAGTCGGCGACGTTCACCTCGGGGCAGATTCAGAACGGTTGTACGCG
CAATTGTTTCCGCTCCAACATGGGGCTGGAGTACACGTCGGACACCCGTATCGATCTGCCGTTTGCCACCCAGGGGTCGA
TGAAGACGGTCACGGCCGACTTCAGCGGCGGCCCGCTGGGCGGTACGGTGAATTTCCAGCGCGTGACCACCGAAATGCGC
GCGTATTCGCTGCTCGGTCAGTTCGGCGGCAGCAATCCGGGTTCCCAGCCGCTCAAGCTGACGATGGGCCTCACGGCCCG
CGCCGGTTCCCTGTTCGGCAACTCGGGACCGTTCTTTTTCCAGCAGCAGTTTGCGGTTGGCGGTGTGATGTTTGGCCAGA
TGGTGCGTGGCTATCCGGAGTTTTCCATCACGCCCAACGGGTTCGATCCCTCCACGGATCAGTACAGCTCGCAGCCAACG
TCCTTCGGCAATGCCTTCATGACGGTGACCGGCGAAATTGGTCTCCGGGTGAATCAGATGTTCTACCTCAACGTGTTTTC
CGACGCCGGAAACAATTGGGGCTCGGCGCGCCAGATCAACCCCACGCGCCTCTTCCGTTCTGCCGGATTCGGGGTATCTA
CCGTAACGCCGCTGGGACCACTGGGTCTGGATATGGCCTACGGCTTTGATCGCACCAAGATCGAGGTGTCCTCAGGACGC
GTCGTGAAGGACCCGAAGTGGCAGTTCCATTTCCGGCTCGGCCAGCTCTTCTAA

Upstream 100 bases:

>100_bases
GGGTTCGGCCGTTTGCCGTGGTGAAGTTGGAACGGGGAGGCGAACCACTGTCCCGGGGTGGGGTCGGACCTTCCCTCGGG
CTCGTATATATTTCGAGGCT

Downstream 100 bases:

>100_bases
CACAGGATGACACTCATGCGCCTTCGTACCGTTCTCGCCACCTGCGCCTTTGTGGCGGCCGCGCCCTCTGTGGCCTCGGC
CCAGGCCGCGCAGAAGATCG

Product: surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>817_residues
MLKRIPLKLVFAAAVLVTGLAPRGVRAQQESASRCMTPDSIAVRGNVRVAESRIRTEAGLQAGAPLNFPALQRVLKALYQ
LGEFDDAQVVCDLETVPGRVLSVLQVRERAVLGDLKVVGPDAVSERSVKDKIDLLIGRPIDPLQVARARARIDSVYEAAG
YYLAQIAIDSTTMDDGRIAITYTIDEGRRLAISGIDVESKGEVSEKRVVGAMKTKPEGFWFWRKGEFDENKFVGDLGERI
PDLYSRLGYVDMRIIKDTLLVDRDRGKGLVQIGIEEGPRFRVGSFEIAGNRRFPTDELRRFYPFDGQDPTLTQRVKGLIK
REAAAPEGIFDQHKWDDAIEKVNNEYRNNGYLYAQIRPVMDRQFVGEDSVPTVNLRWEIDERNPAIVNRIEIIGNDFTAD
DCIRRQIFLVPGGPFNQAALIRSYQSISNMNFFESPMPFPDYRPINEQGDVDIVFRVKEKRTGSVNFGASMGQGGVGFGG
FIGLEQPNLFGLCKSGRLNWQYGRYFNDFTATYTDPALRGSRLSGAVSAYRTQSRFIVGNLGQNIRTGAQFRLGMPVPWS
LFSTFAMSYNGESATFTSGQIQNGCTRNCFRSNMGLEYTSDTRIDLPFATQGSMKTVTADFSGGPLGGTVNFQRVTTEMR
AYSLLGQFGGSNPGSQPLKLTMGLTARAGSLFGNSGPFFFQQQFAVGGVMFGQMVRGYPEFSITPNGFDPSTDQYSSQPT
SFGNAFMTVTGEIGLRVNQMFYLNVFSDAGNNWGSARQINPTRLFRSAGFGVSTVTPLGPLGLDMAYGFDRTKIEVSSGR
VVKDPKWQFHFRLGQLF

Sequences:
NA

Specific function: NA

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA