Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226225405

Identifier: 226225405

GI number: 226225405

Start: 2912033

End: 2912503

Strand: Reverse

Name: 226225405

Synonym: Lm4b_02829

Alternate gene names: NA

Gene position: 2912503-2912033 (Counterclockwise)

Preceding gene: NA

Following gene: 226225404

Centisome position: 99.99

GC content: 29.3

Gene sequence:

>471_bases
ATGATATTTCAACGGCTTTTGAAAACGAGAGATACAGAATTTTATCGAGTTATACAAAACGGGAATATTGAAGATGTGTT
TGGATACTTACTAATTCACGACAAACGGGAACCAGCAGAAATTGATGATTTTAAGGTGTTTGCAAAAAGTAATATAAATA
AAGAAGCTTTTTCAGTGAATATCAAAAAAAATCATATTTACACGATGTTTTTTCACTTTACCGATTTAGAAGAAGAACAG
GAAATTCCAAAATTTACTAAAGTTATTCGTTTTATAGAAGGACTTTTATCTTTTCAGCCAGAAACAAGTCATTATGTTGA
TAATTATTTAATAAAGGAAAAACTAATTTTTGAATATCCTGCTGAATTTGAGAAAATCGGGGAGTTTGCTAAATATTTAG
TAGAGGTTTCTGGTCGGGAAATTACTATTCCAGACACTACGAGAGAAAAATATATCTATTTGACACAATAA

Upstream 100 bases:

>100_bases
AACTAGTTATCCACACTTTCCGGAAAAGGATTTCATTACGACAATGTGTTAAACTATTTACCAGAATAAGAAAAAAGACA
AATAAATGAGGTTGTGAAAA

Downstream 100 bases:

>100_bases
TTTTCGAAAAATGGTTTTTCTCTCTATAAAAATATGATATGATAGTGAACGGAGTCTAAATAGAAATTCGTCTAAATAGT
ATTGACAAAAAAGACCAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDFKVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQ
EIPKFTKVIRFIEGLLSFQPETSHYVDNYLIKEKLIFEYPAEFEKIGEFAKYLVEVSGREITIPDTTREKYIYLTQ

Sequences:

>Translated_156_residues
MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDFKVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQ
EIPKFTKVIRFIEGLLSFQPETSHYVDNYLIKEKLIFEYPAEFEKIGEFAKYLVEVSGREITIPDTTREKYIYLTQ
>Mature_156_residues
MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDFKVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQ
EIPKFTKVIRFIEGLLSFQPETSHYVDNYLIKEKLIFEYPAEFEKIGEFAKYLVEVSGREITIPDTTREKYIYLTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18741; Mature: 18741

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDFKVFAKSNINKEAFSVN
CHHHHHHHHCCCHHHHHCCCCCHHHHEEEEEEECCCCCCCCCHHHEEHHCCCCCCCEEEE
IKKNHIYTMFFHFTDLEEEQEIPKFTKVIRFIEGLLSFQPETSHYVDNYLIKEKLIFEYP
EECCEEEEEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
AEFEKIGEFAKYLVEVSGREITIPDTTREKYIYLTQ
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEC
>Mature Secondary Structure
MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDFKVFAKSNINKEAFSVN
CHHHHHHHHCCCHHHHHCCCCCHHHHEEEEEEECCCCCCCCCHHHEEHHCCCCCCCEEEE
IKKNHIYTMFFHFTDLEEEQEIPKFTKVIRFIEGLLSFQPETSHYVDNYLIKEKLIFEYP
EECCEEEEEEEEECCCCCHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCC
AEFEKIGEFAKYLVEVSGREITIPDTTREKYIYLTQ
HHHHHHHHHHHHHHHHCCCEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA