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The map label for this gene is epsD [H]

Identifier: 226225101

GI number: 226225101

Start: 2602034

End: 2603059

Strand: Reverse

Name: epsD [H]

Synonym: Lm4b_02522

Alternate gene names: 226225101

Gene position: 2603059-2602034 (Counterclockwise)

Preceding gene: 226225102

Following gene: 226225100

Centisome position: 89.37

GC content: 35.38

Gene sequence:

>1026_bases
GTGATTAAGTTGACAATGCTATCTTCGGCAGAAAAAGTAAAAGGTCAGGGTGTGGCATCAGCTTACCGCGAACTTGTGAA
TTTGCTAGAAGAACGATATAAGAATGAAATTGATATGAAGATTAATAGTTTTGAGAAATCGGATATCACGCATTACCATA
CCGTTGATTTCCGTTTTTTTCTTTCGACTTTTTTTAAGAAGAAACGAGGCGTTCGGGTCGGATATGTCCATTTTTTACCC
GAAACAATGGAAGGGAGCCTCAAATTACCTTGGATTGCCCGCGTAGTTTTCTATAAATATTTGATTGGTTTTTATAAACG
AATGGATGAGATTGTTGTTGTAAATCCCTCTTTTATTCCCAAACTTACGGCTTATAATATTCCAGCAGAAAAAATTCATT
ATATCCCGAATTTCGTTTCAAAAAAGAGCTTTTTCCCCATTTCAAAAGGAGAAAAAGAACTTGCTCGGGCAAAATATGAA
ATTCCGGCGGATAAATTTACCGTGATTGGAATTGGTCAAGTGCAACATCGTAAAGGTGTGCTTGATTTTATTGAGGTTGC
TAAACAACTTCCTGATGTTCAATTTGTTTGGGCAGGCGGATTTTCTTTTGGTAAAATCACTTCTGGCTACGAGGAATTGA
AGAAAATCTATGATAATCCACCAAGTAATGTGAAATTCATTGGAATTGTGGATCGTTCTGAAATGAATTCATGTATTAAT
ATGGCAGATGTGTTCTTTATGCCATCTTACAACGAATTATTTCCAATGGCGATTTTGGAAGCGATGAGTTGTGATGTTCC
GATATTATTACGAAATTTAGATCTGTATGAAGAAATTTTAGATGGCTATTATGTAAAAGAAGTAGATAACCCTGGTTTTA
TTAGGGCTATCGAACGTTTAGAAAATGATACAAATTATTATAATGAAATGTTACAAGCATCAAAACGAGGAGCGGCTTAT
TATTCAGAGGATCGACTGGCTGAAATATGGTTGGACTTTTATCAAGGATTATTAACGAAGGAGTGA

Upstream 100 bases:

>100_bases
ATTAAAGTAAAGCCCACGCTGATAAAAAGTAAAATAGCTTCACAAGTATTTTCACTATCATCTTCTACACACGTTCAAAG
GAAAGAGAGGTCATCGCGGC

Downstream 100 bases:

>100_bases
AAGGTAATGAGTGGAGGCGCAAAGAAAAACCTATTTAATATTGCGATTGTATTAGCCATTAGCATCGGCTTCATTATTTG
GCAATTTCAAGGCGTAGATA

Product: galactosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSFEKSDITHYHTVDFRFFLSTFFKKKRGVRVGYVHFLP
ETMEGSLKLPWIARVVFYKYLIGFYKRMDEIVVVNPSFIPKLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYE
IPADKFTVIGIGQVQHRKGVLDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYDNPPSNVKFIGIVDRSEMNSCIN
MADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLYEEILDGYYVKEVDNPGFIRAIERLENDTNYYNEMLQASKRGAAY
YSEDRLAEIWLDFYQGLLTKE

Sequences:

>Translated_341_residues
MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSFEKSDITHYHTVDFRFFLSTFFKKKRGVRVGYVHFLP
ETMEGSLKLPWIARVVFYKYLIGFYKRMDEIVVVNPSFIPKLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYE
IPADKFTVIGIGQVQHRKGVLDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYDNPPSNVKFIGIVDRSEMNSCIN
MADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLYEEILDGYYVKEVDNPGFIRAIERLENDTNYYNEMLQASKRGAAY
YSEDRLAEIWLDFYQGLLTKE
>Mature_341_residues
MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSFEKSDITHYHTVDFRFFLSTFFKKKRGVRVGYVHFLP
ETMEGSLKLPWIARVVFYKYLIGFYKRMDEIVVVNPSFIPKLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYE
IPADKFTVIGIGQVQHRKGVLDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYDNPPSNVKFIGIVDRSEMNSCIN
MADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLYEEILDGYYVKEVDNPGFIRAIERLENDTNYYNEMLQASKRGAAY
YSEDRLAEIWLDFYQGLLTKE

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 39571; Mature: 39571

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSFEKSDITHYHTVDFRFF
CEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEHHHHHH
LSTFFKKKRGVRVGYVHFLPETMEGSLKLPWIARVVFYKYLIGFYKRMDEIVVVNPSFIP
HHHHHHHHCCCEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
KLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYEIPADKFTVIGIGQVQHRKGV
CHHCCCCCHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
LDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYDNPPSNVKFIGIVDRSEMNSCIN
HHHHHHHHHCCCEEEEEECCCCCCHHHCCHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH
MADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLYEEILDGYYVKEVDNPGFIRAIERL
HHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH
ENDTNYYNEMLQASKRGAAYYSEDRLAEIWLDFYQGLLTKE
HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSFEKSDITHYHTVDFRFF
CEEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEHHHHHH
LSTFFKKKRGVRVGYVHFLPETMEGSLKLPWIARVVFYKYLIGFYKRMDEIVVVNPSFIP
HHHHHHHHCCCEEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCC
KLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYEIPADKFTVIGIGQVQHRKGV
CHHCCCCCHHHHHHCCHHHCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECHHHHHHHH
LDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYDNPPSNVKFIGIVDRSEMNSCIN
HHHHHHHHHCCCEEEEEECCCCCCHHHCCHHHHHHHHCCCCCCEEEEEEECHHHHHHHHH
MADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLYEEILDGYYVKEVDNPGFIRAIERL
HHHHEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEECCCCHHHHHHHHH
ENDTNYYNEMLQASKRGAAYYSEDRLAEIWLDFYQGLLTKE
HCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]