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The map label for this gene is atpF

Identifier: 226225081

GI number: 226225081

Start: 2583332

End: 2583844

Strand: Reverse

Name: atpF

Synonym: Lm4b_02502

Alternate gene names: 226225081

Gene position: 2583844-2583332 (Counterclockwise)

Preceding gene: 226225082

Following gene: 226225080

Centisome position: 88.71

GC content: 38.01

Gene sequence:

>513_bases
GTGTTACAACCACATTTAGTAATTGGTTCCGCATTTACGTTTGGTGATGCATTCTTCACACTTTTTGCTTTCGCGATTTT
GCTAGTTTTAATCCGAATTTATGCTTGGAAACCTCTTATGGGAGTTATGAAAGAGCGTGAAGAGCATATTGGTTCTGAAA
TTGATGCGGCGGAAGAAAGCCGTGCTCAAGCAGAACAATTACTTGCTGAACAAAAAAGTGTTTTACAACAAGCTCGTGTG
GAATCTCAAACAATGATTGAGAATGCAAAACAGCTTGGTGAAAAAGAACGCGAAGAAATTGTCAAAACTGCTAGACGTGA
ATCAGAACGTATAAAAGAAGAAGCAAAATCCGATATTGCACGTGAAAAAGAAGATGCTATTTCTGCTCTTCGCGAACAAG
TCGGTTCCTTATCTGTTCTTATTGCATCGAAAGTCATCGAAAAAAATCTGGATGAAAAAGAACAATCTAACCTTATCCAA
GATTATATCGAAAGGCTAGGGGATGACAAATGA

Upstream 100 bases:

>100_bases
TCTTAATAAATAATTTGAAGGAAGTTGAGGAAATAAAACCTCATCTCTTTCGTTTTGAACGAATAATTCAAGCGAATGTA
TAGAAAGGAGTGAAACTGGC

Downstream 100 bases:

>100_bases
GTAAAGATTTGGAAGTTGCAGGTCGCTATGCCAATGCGCTTTTTCAAGTAGCCCAAGATAAAGATTTAGTCGACGTTTTT
TCAGAAGAACTAACTGAATT

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b [H]

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMKEREEHIGSEIDAAEESRAQAEQLLAEQKSVLQQARV
ESQTMIENAKQLGEKEREEIVKTARRESERIKEEAKSDIAREKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQ
DYIERLGDDK

Sequences:

>Translated_170_residues
MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMKEREEHIGSEIDAAEESRAQAEQLLAEQKSVLQQARV
ESQTMIENAKQLGEKEREEIVKTARRESERIKEEAKSDIAREKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQ
DYIERLGDDK
>Mature_170_residues
MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMKEREEHIGSEIDAAEESRAQAEQLLAEQKSVLQQARV
ESQTMIENAKQLGEKEREEIVKTARRESERIKEEAKSDIAREKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQ
DYIERLGDDK

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) [H]

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family [H]

Homologues:

Organism=Escherichia coli, GI1790174, Length=164, Percent_Identity=29.2682926829268, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002146
- InterPro:   IPR005864 [H]

Pfam domain/function: PF00430 ATP-synt_B [H]

EC number: 3.6.3.14

Molecular weight: Translated: 19333; Mature: 19333

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMKEREEHIGSEIDAAEES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RAQAEQLLAEQKSVLQQARVESQTMIENAKQLGEKEREEIVKTARRESERIKEEAKSDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQDYIERLGDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMKEREEHIGSEIDAAEES
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
RAQAEQLLAEQKSVLQQARVESQTMIENAKQLGEKEREEIVKTARRESERIKEEAKSDIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQDYIERLGDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]