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The map label for this gene is atpH

Identifier: 226225080

GI number: 226225080

Start: 2582796

End: 2583335

Strand: Reverse

Name: atpH

Synonym: Lm4b_02501

Alternate gene names: 226225080

Gene position: 2583335-2582796 (Counterclockwise)

Preceding gene: 226225081

Following gene: 226225079

Centisome position: 88.69

GC content: 36.48

Gene sequence:

>540_bases
ATGAGTAAAGATTTGGAAGTTGCAGGTCGCTATGCCAATGCGCTTTTTCAAGTAGCCCAAGATAAAGATTTAGTCGACGT
TTTTTCAGAAGAACTAACTGAATTAAAAGCGGCCTTAAAAGCTAATGAAGATTTTGTAAAACTACTTGAAAATCCTACTT
TCACGACCGAGCAAAAGAAAAATCTTGCCAGCGCTGTTTTTGAAAAAATCAATCCGACATTAAGAGATTTTATTTATCTT
TTAATTGACCGTAGCAGAGAAGATTATCTTTCTGTTATTGCGGACGTTTACCAAAAACGCGTAAACGACTTGAATGGAGT
TGCGGATGCAGATGTTTATTCTGTTGTTCCACTTTCCGAACAAGAACTTACGGCGCTCTCGAGAGTATTTGCTACGAAAA
TGAACAAAACAAAGTTAAACATTCAAAATCACATTGATAAATCCCTTCTTGGTGGAGTCAAAGTGGTTATTGGAACCCGT
ATATATGATGACAGTCTAAAAACGAAATTAAAGGACATGGAACGGCAAATTAAAGCCTAG

Upstream 100 bases:

>100_bases
TATCTGTTCTTATTGCATCGAAAGTCATCGAAAAAAATCTGGATGAAAAAGAACAATCTAACCTTATCCAAGATTATATC
GAAAGGCTAGGGGATGACAA

Downstream 100 bases:

>100_bases
TTTCCGTTTAACGAGGGGTGAAATCAATGAGCATTAAGGCTGAAGAGATCAGCTCAATCATAAAACAGCAGATTGAAAAT
TATCAATCTGAACTAAAAGT

Product: F0F1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta [H]

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MSKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANEDFVKLLENPTFTTEQKKNLASAVFEKINPTLRDFIYL
LIDRSREDYLSVIADVYQKRVNDLNGVADADVYSVVPLSEQELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTR
IYDDSLKTKLKDMERQIKA

Sequences:

>Translated_179_residues
MSKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANEDFVKLLENPTFTTEQKKNLASAVFEKINPTLRDFIYL
LIDRSREDYLSVIADVYQKRVNDLNGVADADVYSVVPLSEQELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTR
IYDDSLKTKLKDMERQIKA
>Mature_178_residues
SKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANEDFVKLLENPTFTTEQKKNLASAVFEKINPTLRDFIYLL
IDRSREDYLSVIADVYQKRVNDLNGVADADVYSVVPLSEQELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTRI
YDDSLKTKLKDMERQIKA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction [H]

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000711 [H]

Pfam domain/function: PF00213 OSCP [H]

EC number: 3.6.3.14

Molecular weight: Translated: 20261; Mature: 20130

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANEDFVKLLENPTFTTEQKK
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHH
NLASAVFEKINPTLRDFIYLLIDRSREDYLSVIADVYQKRVNDLNGVADADVYSVVPLSE
HHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCH
QELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTRIYDDSLKTKLKDMERQIKA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANEDFVKLLENPTFTTEQKK
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCHHHHH
NLASAVFEKINPTLRDFIYLLIDRSREDYLSVIADVYQKRVNDLNGVADADVYSVVPLSE
HHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCH
QELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTRIYDDSLKTKLKDMERQIKA
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]