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The map label for this gene is ywzB [H]

Identifier: 226225075

GI number: 226225075

Start: 2578079

End: 2578315

Strand: Reverse

Name: ywzB [H]

Synonym: Lm4b_02496

Alternate gene names: 226225075

Gene position: 2578315-2578079 (Counterclockwise)

Preceding gene: 226225076

Following gene: 226225074

Centisome position: 88.52

GC content: 25.74

Gene sequence:

>237_bases
ATGTATAATATTATTATGGAATCACCATATGTCATCATCATTTCACATTTACTATTTATTGTAATTACTTTTTGGGCACT
CCAAGCTATTAATTATGAAAAATTCATCAAGAAGAATCATGTAACACAAGCTAGATTATTATTTGTGATTATTTCGATTG
TATTAGGTTATACATTAAGCAATTTTTTCTTGGATTATTTGGCAGCTTCCAAACAGTTAATTAACTTTTTTAGTTAG

Upstream 100 bases:

>100_bases
ACAGTGCCGGGAAGTTTTTTTATATGCATAAGTGTATTAACTGTTTTTTTCTAGAGGTATTTGTTAAAATGAGTAGTAGC
GAAATATGAGGAGAGAACGC

Downstream 100 bases:

>100_bases
AAAAAGGTACTATAGTAGTCAAAAATTAATAGAAGCTTATAACAACTTTAATATTACGTTAAAATCAGTTGATATTTTAG
GGTGATAAGTGGTAGAATTA

Product: predicted membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQARLLFVIISIVLGYTLSNFFLDYLAASKQLINFFS

Sequences:

>Translated_78_residues
MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQARLLFVIISIVLGYTLSNFFLDYLAASKQLINFFS
>Mature_78_residues
MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQARLLFVIISIVLGYTLSNFFLDYLAASKQLINFFS

Specific function: Unknown

COG id: COG4836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009526 [H]

Pfam domain/function: PF06612 DUF1146 [H]

EC number: NA

Molecular weight: Translated: 9165; Mature: 9165

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQARLLFVIISIVLGYTLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
NFFLDYLAASKQLINFFS
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQARLLFVIISIVLGYTLS
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCHHHHHHHHHHHHHHHHHHHH
NFFLDYLAASKQLINFFS
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]