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The map label for this gene is yuxO [H]

Identifier: 226224937

GI number: 226224937

Start: 2432939

End: 2433310

Strand: Reverse

Name: yuxO [H]

Synonym: Lm4b_02357

Alternate gene names: 226224937

Gene position: 2433310-2432939 (Counterclockwise)

Preceding gene: 226224940

Following gene: 226224928

Centisome position: 83.54

GC content: 37.9

Gene sequence:

>372_bases
ATGGGACTTCAAGAAACTATTGGCATTGAAATTGTTTCAGTAGAAAAAGGAAAAGCCGTTGTTCAATTAGAAGTGACAGA
AAAAGTCCATCAACCGTTTGGCTATTTGCATGGAGGGGTTTCTGTTGTTTTAGCGGAACATGCAGCAAGTATTGGTGCTG
CTAAATCAATCGAACCCGATGAAATCGTCTTTGGTTTAGAAATTAATGCCAATCACTTGGCATCAAAACAAGAAGGATTA
GTAACAGCGACTGCAGAAGCAATCCACCTTGGCAAAAGTACCCAAGTATGGGAAATTAAAATCACTGACGAAACGGAAAA
ACTAATTTGTATTAGCAGATGTACCATAGCAGTCAAAAAGAAACGAAAATAA

Upstream 100 bases:

>100_bases
CTTATTTTACCACAATGAGCTTATTAAAAACCTTTTCTAGAGTTTTTCTACCAACTCTTATATAATAAAGTATAAATCAA
ATTCGGAAAGAAGGGAACAT

Downstream 100 bases:

>100_bases
AAAGCATGGCGCGAGTTCATCAATTGACCTCTGCCATGCTTTTTTTATTTCTCCGTTTTATCATCGTCTGATTCAGTTTC
ACTTTCATCCTGCTCGATGA

Product: thioesterase family protein

Products: NA

Alternate protein names: ComA operon protein 2 [H]

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPDEIVFGLEINANHLASKQEGL
VTATAEAIHLGKSTQVWEIKITDETEKLICISRCTIAVKKKRK

Sequences:

>Translated_123_residues
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPDEIVFGLEINANHLASKQEGL
VTATAEAIHLGKSTQVWEIKITDETEKLICISRCTIAVKKKRK
>Mature_122_residues
GLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPDEIVFGLEINANHLASKQEGLV
TATAEAIHLGKSTQVWEIKITDETEKLICISRCTIAVKKKRK

Specific function: Is not required for competence [H]

COG id: COG2050

COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thioesterase PaaI family [H]

Homologues:

Organism=Escherichia coli, GI1787976, Length=96, Percent_Identity=47.9166666666667, Blast_Score=94, Evalue=2e-21,
Organism=Escherichia coli, GI1786813, Length=112, Percent_Identity=37.5, Blast_Score=77, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003736
- InterPro:   IPR006683 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 13257; Mature: 13125

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPD
CCCCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCHHCCCCEEEEEHHHHHCCCCCCCCCC
EIVFGLEINANHLASKQEGLVTATAEAIHLGKSTQVWEIKITDETEKLICISRCTIAVKK
CEEEEEEECCHHCCCCCCCEEEEEEHEEECCCCCEEEEEEECCCCCEEEEEEEEEEEEEE
KRK
CCC
>Mature Secondary Structure 
GLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVLAEHAASIGAAKSIEPD
CCCCCCCEEEEEECCCCEEEEEEEHHHHHCCCCHHCCCCEEEEEHHHHHCCCCCCCCCC
EIVFGLEINANHLASKQEGLVTATAEAIHLGKSTQVWEIKITDETEKLICISRCTIAVKK
CEEEEEEECCHHCCCCCCCEEEEEEHEEECCCCCEEEEEEECCCCCEEEEEEEEEEEEEE
KRK
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377 [H]