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The map label for this gene is 226224940

Identifier: 226224940

GI number: 226224940

Start: 2435270

End: 2435899

Strand: Reverse

Name: 226224940

Synonym: Lm4b_02360

Alternate gene names: NA

Gene position: 2435899-2435270 (Counterclockwise)

Preceding gene: 226224941

Following gene: 226224937

Centisome position: 83.63

GC content: 26.98

Gene sequence:

>630_bases
TTGTTTAATGAAAAAGTAAAAGAAATGATCCGAGAATTGGATAAATATAAATTACAAGATAAATGGGTTCGCTTTGAAAA
ACTTTCTAAAAACAAGAAAATTGATAGTGAAACTTTTCAAGATGAATTTATTATTATAACAAATGGAATTCTTCATGTGG
AAAATAAAAAATTCCAGATACTTCATTTTTTTTCTAATGGAGATATAATTAACCAACAAGTTGCCAAAATTAGCGGAGAA
AATGAATTAAGATTAGTTTGTGATACAGATGTTTCCTTAATTTTTATTGATAGGGAATATTTCTTAAACTATGCTACCAA
TAAGCCTTCTTATATGGAGTGGCTTTTAGAAGAAACATTAATAAACAATAAGAACCTTTATAATGAGTTAATTAAGTATG
ACTTGTCCGCAGAAGAAAGAATAGTCTATGCCCTCCAGTACCTATGTGACAAATTAGAAATTGAAAGTGAAAATGGCTAC
CAACAAATACCTAAATATATTAATAAGATAAAAATGGCGAAATACGGCAAAATATCTCGCAAACAACTAAACGAAAAAAT
AATACTTCTCCTCGATAAGGAAGTATTAAAAGAAAAAAAAGGAAGATTCTATATAAAAAAATCAGCATAA

Upstream 100 bases:

>100_bases
AATAAAATCTATATAAAGATAGCAAAATAGTGTGTAATTTCCACATAGGTCTTATCTCTAATCCTGCTAAACTAAGTAAA
ACTAGTAGGAGGAGATACAT

Downstream 100 bases:

>100_bases
AAAAACTAAGGATTTCTCCTTAGTTTTTATGCTGTTTTTTTGAAGTTAACTAACCAATTTCTATTCACTATAAATGCAGT
TAATAAAATAAATGGAAAGA

Product: transcription regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MFNEKVKEMIRELDKYKLQDKWVRFEKLSKNKKIDSETFQDEFIIITNGILHVENKKFQILHFFSNGDIINQQVAKISGE
NELRLVCDTDVSLIFIDREYFLNYATNKPSYMEWLLEETLINNKNLYNELIKYDLSAEERIVYALQYLCDKLEIESENGY
QQIPKYINKIKMAKYGKISRKQLNEKIILLLDKEVLKEKKGRFYIKKSA

Sequences:

>Translated_209_residues
MFNEKVKEMIRELDKYKLQDKWVRFEKLSKNKKIDSETFQDEFIIITNGILHVENKKFQILHFFSNGDIINQQVAKISGE
NELRLVCDTDVSLIFIDREYFLNYATNKPSYMEWLLEETLINNKNLYNELIKYDLSAEERIVYALQYLCDKLEIESENGY
QQIPKYINKIKMAKYGKISRKQLNEKIILLLDKEVLKEKKGRFYIKKSA
>Mature_209_residues
MFNEKVKEMIRELDKYKLQDKWVRFEKLSKNKKIDSETFQDEFIIITNGILHVENKKFQILHFFSNGDIINQQVAKISGE
NELRLVCDTDVSLIFIDREYFLNYATNKPSYMEWLLEETLINNKNLYNELIKYDLSAEERIVYALQYLCDKLEIESENGY
QQIPKYINKIKMAKYGKISRKQLNEKIILLLDKEVLKEKKGRFYIKKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25059; Mature: 25059

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNEKVKEMIRELDKYKLQDKWVRFEKLSKNKKIDSETFQDEFIIITNGILHVENKKFQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEECCCEEEE
LHFFSNGDIINQQVAKISGENELRLVCDTDVSLIFIDREYFLNYATNKPSYMEWLLEETL
EEEECCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEEHHHHEEECCCCCHHHHHHHHHHH
INNKNLYNELIKYDLSAEERIVYALQYLCDKLEIESENGYQQIPKYINKIKMAKYGKISR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHH
KQLNEKIILLLDKEVLKEKKGRFYIKKSA
HHCCCEEEEEECHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MFNEKVKEMIRELDKYKLQDKWVRFEKLSKNKKIDSETFQDEFIIITNGILHVENKKFQI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCEEEECCCEEEE
LHFFSNGDIINQQVAKISGENELRLVCDTDVSLIFIDREYFLNYATNKPSYMEWLLEETL
EEEECCCCCHHHHHHHCCCCCCEEEEEECCCEEEEEEHHHHEEECCCCCHHHHHHHHHHH
INNKNLYNELIKYDLSAEERIVYALQYLCDKLEIESENGYQQIPKYINKIKMAKYGKISR
CCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHH
KQLNEKIILLLDKEVLKEKKGRFYIKKSA
HHCCCEEEEEECHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA