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The map label for this gene is ywgB [H]

Identifier: 226224912

GI number: 226224912

Start: 2401164

End: 2401634

Strand: Reverse

Name: ywgB [H]

Synonym: Lm4b_02331

Alternate gene names: 226224912

Gene position: 2401634-2401164 (Counterclockwise)

Preceding gene: 226224915

Following gene: 226224911

Centisome position: 82.45

GC content: 38.0

Gene sequence:

>471_bases
ATGAAGTTGAGCAAAAGTATGGATCAGGTATTTTGTATTATGACGATGTTGTACACCCAGAAGGTAGATGTTCCCATTTC
TTCCGTAACTATTCATCACCGTTTGCGTGATTCGTCGCCGTCTTATATTAGTAAAATTTTGAGGAAGCTAGTCGTTAGCG
GGCTGATTAATTCAGTTTCGGGTAATAACGGTGGTTTCACGCTTGCTAAAGACCCTGAAGAAATTAATTTGCTGGATATT
GTAGAAGCAGTGGAAGGGAAAATCGATACATACCCAGATTCCGACTTAATCCACACTGTTTTCTCTGACTATCATGAATT
TGCAGAGTCCGGTATTCACACCATTACAAGTGCTTTTAGAAACGCTGATAAAGAATACGCTAATTATTTATACTCACAAA
AATTATCTGTTTTAGTAGAGCAAGTTATTGGGAAAGAACGAACCACTATCATAGATTGGAACGAAGCGTAA

Upstream 100 bases:

>100_bases
AACTCTTGCACTTTAAAAAAAATGGGTGTATTGTATATAGATGTTAAATGTCCATTAAGGATATTGAAAGGTAATAATGG
GAAGAGGGAGGATTTTTATT

Downstream 100 bases:

>100_bases
TAAATCTTTAAAAGAAAGAAGTGCGGTAATAAAATGGATATGGTAAAAAATGAGTGGAAGAAATTATTTAAAAACAAAAT
ACTACTTTTATCATTTGTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 156

Protein sequence:

>156_residues
MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYISKILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDI
VEAVEGKIDTYPDSDLIHTVFSDYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA

Sequences:

>Translated_156_residues
MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYISKILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDI
VEAVEGKIDTYPDSDLIHTVFSDYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA
>Mature_156_residues
MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYISKILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDI
VEAVEGKIDTYPDSDLIHTVFSDYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 17561; Mature: 17561

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYISKILRKLVVSGLINSVS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GNNGGFTLAKDPEEINLLDIVEAVEGKIDTYPDSDLIHTVFSDYHEFAESGIHTITSAFR
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC
>Mature Secondary Structure
MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYISKILRKLVVSGLINSVS
CCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
GNNGGFTLAKDPEEINLLDIVEAVEGKIDTYPDSDLIHTVFSDYHEFAESGIHTITSAFR
CCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
NADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]