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The map label for this gene is 226224915

Identifier: 226224915

GI number: 226224915

Start: 2404966

End: 2406480

Strand: Reverse

Name: 226224915

Synonym: Lm4b_02335

Alternate gene names: NA

Gene position: 2406480-2404966 (Counterclockwise)

Preceding gene: 226224916

Following gene: 226224912

Centisome position: 82.62

GC content: 37.03

Gene sequence:

>1515_bases
ATGCTTACAAATTATATCGAAAAGGATATTAAGAGAAAATGTTTGATTTGTGATTTTCTACTAAAGAATAAACATACGAA
TTTAGATGAAATTGCGGAATATATGGAGACTTCTCGGGTGACGGTAAGGTCGGATATTCATGCGTTGAATGAGGAATTGG
ATGGCTTGATTGTTATTCAGATGAAAGAATGTGTGGATAATTGGGTATACCAATGTCGGTTGCAAAATGGGGCGACGGAA
CGGAAAGTTTTGTATAAGTTATATGATAACTCGATGTTTTTGAAATGTGTGGCGTTTTTTGTTACGAATGTGGAGGAGCG
CAAATTCACAGATTTTATGGATACGTATTTTATTTCTCATTCGCATGCGTATCGGTTGAAGCACAAGGTAGAAGCGTTTC
TTCGAGAAATTGATTTGACACTTGATAATAATCGAATTACTGGGAAGGAATACAGGGTTCGGTATTTGATTGCGCTTCTT
CAAGCAGAATATGGTGTGCTTATTTATCCACTTTTGGATGAGGAGAAGCAAATGATTGATGACTTTATGGCGACGTTGAA
TTTGCGGATTAATATTGATACGTTGGCGCATAATGCGGAAGGGCATGCGTATTTTCGGTCGCTGATTTCGATGGTGTTTA
AGAGGGATATTCCGACTAGTGCAATTATATTGGATGAACAGTGTCAAAAATATATTGAGTCTTCAAGCTTTCTTGCTATG
GTTCGGAAAAGTAGTAAGGAAACACTTGAAAAAGAGCTTGGTCAGGAATTTTCATATAATGATTACTTGTATTTAATGCT
GATTTATTATTCGACTAATTTTAGTATCATTGATGCTTCCATGAAAAAGGTGGAGTTGGAGCAGTTTAATGAGTTGATAA
TGAAAAATGCAGATTTGCAAGTTTTGATTGATTTATTTGAGGAATATTTTGGTCCGGAGGTTGTTAATCATTCGCTTTTT
CGGGCGGCACTTTGTTACTTTTTGAAGAAGACGTTGTTTAATTTGCAGGGACTTATTCCGAGTAATGAGCGATTACTGGA
TAAAAAGTATGAGCCACTTTATATGGTTGTGAAAAATGTTTTGGAGCGCTGGAATGAGGCTAGTGAATATCGAGTATTAT
TAATTGATTCGCACATTAATTATTTGACGATTCATTTGTATCCACTGATTTATAAATGGAACAATCCGGTGCAAATTTGT
ATTTTTTCCTTTAATTTAATTAATTTCGAGTCGTGTAAGTTTCAGGTGGAGCAAGAGCTGGGGCGGAAGGTGACGGTGCA
TGAGACGATGTTTAATTCGGTGGAGGAGTTGAACCAGGTTTTAGCGGAGTCAAGTGAGCCAACGATTGTGCTTTGTCATC
CGAACTGTGAAATGGAATTAAAGGAAGCGGTAGATGGGATGATTATTCCGATTTCCTTGGCTTTTTTTGACAGAGATCTT
GTAGATGTAGAAAGGGCGATTCAGTCGCTTAGAATAAAAGAACATGAAAAAAGGCTAGCCTATTTGAGAGGCTAG

Upstream 100 bases:

>100_bases
AAAAATTTATATAGTGAGAAGTTGCAATTTTATGTGATTAAATTAACATGTTAAGAAGGCGAAAATTGTTGTGTATTAAT
CTTTCACGGAGAGGATAGTT

Downstream 100 bases:

>100_bases
CCTTTTTATTAATGTGTGAAGCCGTGGACGCCGGATTGTTGGGTATCATGGAAGAGGATGTGAGCGTTGTTTAGTTCTTG
AATAGAGGCTTGGAAATCTT

Product: RofA regulatory protein

Products: NA

Alternate protein names: Regulatory Protein-RofA ; RofA/Nra-Like Transcriptional Regulator; RofA Regulatory Protein; Transcriptional Regulator RofA Familiy; Regulatory Protein; RofA Family Transcriptional Regulator; Regulatory Protein RofA

Number of amino acids: Translated: 504; Mature: 504

Protein sequence:

>504_residues
MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRSDIHALNEELDGLIVIQMKECVDNWVYQCRLQNGATE
RKVLYKLYDNSMFLKCVAFFVTNVEERKFTDFMDTYFISHSHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALL
QAEYGVLIYPLLDEEKQMIDDFMATLNLRINIDTLAHNAEGHAYFRSLISMVFKRDIPTSAIILDEQCQKYIESSSFLAM
VRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSIIDASMKKVELEQFNELIMKNADLQVLIDLFEEYFGPEVVNHSLF
RAALCYFLKKTLFNLQGLIPSNERLLDKKYEPLYMVVKNVLERWNEASEYRVLLIDSHINYLTIHLYPLIYKWNNPVQIC
IFSFNLINFESCKFQVEQELGRKVTVHETMFNSVEELNQVLAESSEPTIVLCHPNCEMELKEAVDGMIIPISLAFFDRDL
VDVERAIQSLRIKEHEKRLAYLRG

Sequences:

>Translated_504_residues
MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRSDIHALNEELDGLIVIQMKECVDNWVYQCRLQNGATE
RKVLYKLYDNSMFLKCVAFFVTNVEERKFTDFMDTYFISHSHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALL
QAEYGVLIYPLLDEEKQMIDDFMATLNLRINIDTLAHNAEGHAYFRSLISMVFKRDIPTSAIILDEQCQKYIESSSFLAM
VRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSIIDASMKKVELEQFNELIMKNADLQVLIDLFEEYFGPEVVNHSLF
RAALCYFLKKTLFNLQGLIPSNERLLDKKYEPLYMVVKNVLERWNEASEYRVLLIDSHINYLTIHLYPLIYKWNNPVQIC
IFSFNLINFESCKFQVEQELGRKVTVHETMFNSVEELNQVLAESSEPTIVLCHPNCEMELKEAVDGMIIPISLAFFDRDL
VDVERAIQSLRIKEHEKRLAYLRG
>Mature_504_residues
MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRSDIHALNEELDGLIVIQMKECVDNWVYQCRLQNGATE
RKVLYKLYDNSMFLKCVAFFVTNVEERKFTDFMDTYFISHSHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALL
QAEYGVLIYPLLDEEKQMIDDFMATLNLRINIDTLAHNAEGHAYFRSLISMVFKRDIPTSAIILDEQCQKYIESSSFLAM
VRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSIIDASMKKVELEQFNELIMKNADLQVLIDLFEEYFGPEVVNHSLF
RAALCYFLKKTLFNLQGLIPSNERLLDKKYEPLYMVVKNVLERWNEASEYRVLLIDSHINYLTIHLYPLIYKWNNPVQIC
IFSFNLINFESCKFQVEQELGRKVTVHETMFNSVEELNQVLAESSEPTIVLCHPNCEMELKEAVDGMIIPISLAFFDRDL
VDVERAIQSLRIKEHEKRLAYLRG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59479; Mature: 59479

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRSDIHALNEELDGLIVIQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
MKECVDNWVYQCRLQNGATERKVLYKLYDNSMFLKCVAFFVTNVEERKFTDFMDTYFISH
HHHHHHHHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALLQAEYGVLIYPLLDEEKQMID
CHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH
DFMATLNLRINIDTLAHNAEGHAYFRSLISMVFKRDIPTSAIILDEQCQKYIESSSFLAM
HHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHH
VRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSIIDASMKKVELEQFNELIMKNADLQ
HHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHH
VLIDLFEEYFGPEVVNHSLFRAALCYFLKKTLFNLQGLIPSNERLLDKKYEPLYMVVKNV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHH
LERWNEASEYRVLLIDSHINYLTIHLYPLIYKWNNPVQICIFSFNLINFESCKFQVEQEL
HHHCCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHH
GRKVTVHETMFNSVEELNQVLAESSEPTIVLCHPNCEMELKEAVDGMIIPISLAFFDRDL
CCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCEEEEEEEEHHCCHH
VDVERAIQSLRIKEHEKRLAYLRG
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRSDIHALNEELDGLIVIQ
CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEE
MKECVDNWVYQCRLQNGATERKVLYKLYDNSMFLKCVAFFVTNVEERKFTDFMDTYFISH
HHHHHHHHHEEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
SHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALLQAEYGVLIYPLLDEEKQMID
CHHHHHHHHHHHHHHHHCCEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHH
DFMATLNLRINIDTLAHNAEGHAYFRSLISMVFKRDIPTSAIILDEQCQKYIESSSFLAM
HHHHHEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHCCCHHHHH
VRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSIIDASMKKVELEQFNELIMKNADLQ
HHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEHHHHHHHHHHHHHHHHCCCCHH
VLIDLFEEYFGPEVVNHSLFRAALCYFLKKTLFNLQGLIPSNERLLDKKYEPLYMVVKNV
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHH
LERWNEASEYRVLLIDSHINYLTIHLYPLIYKWNNPVQICIFSFNLINFESCKFQVEQEL
HHHCCCCCCEEEEEEECCCCEEEEEEEEEEEECCCCEEEEEEEEEEEEEHHHHHHHHHHH
GRKVTVHETMFNSVEELNQVLAESSEPTIVLCHPNCEMELKEAVDGMIIPISLAFFDRDL
CCEEEEHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHCCEEEEEEEEHHCCHH
VDVERAIQSLRIKEHEKRLAYLRG
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA