| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yhaN [H]
Identifier: 226224829
GI number: 226224829
Start: 2314683
End: 2317406
Strand: Reverse
Name: yhaN [H]
Synonym: Lm4b_02248
Alternate gene names: 226224829
Gene position: 2317406-2314683 (Counterclockwise)
Preceding gene: 226224830
Following gene: 226224828
Centisome position: 79.56
GC content: 35.79
Gene sequence:
>2724_bases ATGAGAATAACATCTATTGATATCATTGGTTACGGAAAATGGTCCGATGCTCATTTTAATAATATTGCCAATTTCCAAGT ATTCTATGGTGAAAATGAAGCCGGAAAATCAACTATTATGGCTTTTATACATAGTATTTTGTTCGGTTTCCCAACGAAAC AACAATCGATACCGCGCATGGAGCCAAAAAACGGTGGACCATATGGTGGAAGATTAACACTAGAAGACACACCTTTAGGA AAAGTCATCATTGAACGCTTGAAAGGAAAAGCAACGGGAGATGTTCGGATATATTACGGGGATGGCCAAACCGCTGGAGA AGAAAAATTACCAGAAATTATCGGTGAAATTGATCGAAACACTTATGAGGCTATTTTTTCATTTGATATACACGGACTAC AAAATATTCATCAATGGAAAAAGAAAGAATTTGAACGCTATTTGTTAGCAACTGGAACAACAGGATCGGACGCTCTTCTA AAGGCAGCCGAAGCATTACAAAAAAAATTAGATAGTCTATATAAACCAAGTGGGCGAAATCCACTAATTAACCAACAACT AAAAAAAGTAAAAGAAGCCCAACAAGCTTTTCAAAACGCAAAAAAACAAAATGCGCAATATGAACAATTAATCAATGAGA AAGAGCAAGCGATAGTAAGACAAACAGAGCTACAAAAAGAAAAAACAACAATGCGAGTTGAGTTAGATGCATTAGCAACA TTAGCGGATTTGTGGCCGTTATACCAAGAATGGAAAGCACTCAGTAACAAAGCTTCTGAAACAACAGAAGCTACTTTTCC GCCTGATGGAGTTATTCGTTTAGAACACTTGAATCTCCGAGAAAAAGAATGGCAAAATCAACTTATCCAACTAGAAGAAC GCCAAAAAAATCTAATTAGCAACAATAATTATGAACATAGTGCTTTTTTTGCCGAAAATGAAGCAGAAGTTACTTATCTA ATCGAAACTTATGCAGCTTTTGGAGAGCGAGAAATCCAGTTAAAGAATTTAAAGCAAGAGATTAAGTTTCAGCAAGTCGA CACAAAACAACCACTTAGAATATGGTCGAGCGAATTAGAACAAACAATGATTCACTTAAAAGAAAAAGAACAGTCCCACA AAGAGCAACAACATGATATCCAGCTAAAATTAAAATTCACTAATAACTCCGAAGAAAAACTCCAAAAAAAGATTGATCAA ATAGAAGCGGAGATGTGGGATAATAAAACATTCCAACAAGCAAAAGAAAAAATGCAGGATAGTCCTAAAACTTCTAAAAC TAAGACGATGGTTTCCTTGGGCATATTTGCAGTAGCGTTCGTCTTGATGATAGTTTTCCAAGCTATTTGGAGTGTAGCAC TTGTTTTTGTTTCTGCACTTATAGTGGGTTATGCTTTTATTACTACTGGAAAATCTTCTCCAACAAATAATGAGCAAATT CTAGCTTTTTTAGAACAAAAGAAAATAAGACAAGAATGGCAACAACTTTTGAACGAAATGGATATGGTTGCTTCACAAAT TGCTGAATTAAGAGCAGCTGAGAATAAACTAAGCGAAAATATCTACCAACATACGATGGAACTTAGACACTTCTTTTCTG ACTTGGGAATAAACACTGAACCTAGTTCGAACTGGCATTACGAACTTAGCATCTACAAAAAAAACAGTGAAAAAAGGCAA TTAGCAATGGAACTTATCTCCAAACTAGAACCATTAGCAGAGAAGCAAGAAGCATATAGAGCAAGATTAGAAAACTTAAA ATTGCCTATAGATTATACGGACACGGAAGAAAAAATTACTTTTCTTCGTCAAGGTTTGCTCTATTATCGAAACCACCTAA CTGAAAATGCAAAGCTCGCTGAAAAATTAGAACAAGTAACGATGCAATTAGACTTAGTTAAACAAGATTTATTACTTGTA AAGAAAGAAAAGGCAGACTTGCTAGAACGTGCGAATGTGAGTAACGAAGAAGACTTTCGTATGGCTGCAATGCGCGTAAA AGAAGAACAGAAGTGGCGTGAACGATTAGTTTTAATAGAAGCGCAACTTGAACCAGAAAAGCGAGAAGCTCTAAATAGAT ATGAAAATCAAGCAACTATCAAAGAAAAAGAGCTCCAATTAGAAGAATCACTGCGGCAAATAGAATTAGAACAAGAGCAA CTTCACGCCTCACTCGCAGCACAAAACCATGCAATAGACAAATTGGAAGAAGGCGGGACTTTCGCTGTATTGATGCAAGA ATTTTATTCAGAAAAAAGCAAATTACAACAAATCTCAGCTGAGTGGACAGAAACAAAACTAGCGCTTCAAATGTTGCAAA ACACGATGCAGCAGTTACAAGAAGGAAAACTTCCAAAAACATTAAAACTGGCAAGTGAATATTTTAATCATTTAACTAGT GGGAACTATAGGAAAGTATACTTACAAGATAATAGGCTTCAAGTAGAAAGTAAGGATAGAATTCCGTTCTTCCCGGAAGA ACTTAGCCAAGCGACTAAAGAGCAGCTATATTTGGCTATTCGTTTTGCGCTAATTGATGTTATTCACAAAGACTTTCCAC TACCAATCATTATTGATGATGGATTTGTGCATTTTGATTCCTCGAGAATGGGGCAAATGATGCAGCTGCTTCAAAAACGA AAAAGTGAAAACCAAGTCATTTTTTTCACATGCCATCAAGAAACTCGCAAATATTTTTCCAGTGAGGACATACGCGTGCT ATAA
Upstream 100 bases:
>100_bases GATACTTGGATGATTTGTCTGAAATTGATCGTGAGAGGCTACTACATGATGCTTTAATGGAATTAGGGAGGACGCTTGCA GAAGTGGAAGGTGATGATAA
Downstream 100 bases:
>100_bases TGGGTGAAGAAACTTCTTACTACAGAAAGAAAGAAGGCGATATAATGGAAAAAAGATTATTAGACTTTGAAGTTGGGGAA ACAGTAGACTTATTCTTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 907; Mature: 907
Protein sequence:
>907_residues MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIHSILFGFPTKQQSIPRMEPKNGGPYGGRLTLEDTPLG KVIIERLKGKATGDVRIYYGDGQTAGEEKLPEIIGEIDRNTYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALL KAAEALQKKLDSLYKPSGRNPLINQQLKKVKEAQQAFQNAKKQNAQYEQLINEKEQAIVRQTELQKEKTTMRVELDALAT LADLWPLYQEWKALSNKASETTEATFPPDGVIRLEHLNLREKEWQNQLIQLEERQKNLISNNNYEHSAFFAENEAEVTYL IETYAAFGEREIQLKNLKQEIKFQQVDTKQPLRIWSSELEQTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEEKLQKKIDQ IEAEMWDNKTFQQAKEKMQDSPKTSKTKTMVSLGIFAVAFVLMIVFQAIWSVALVFVSALIVGYAFITTGKSSPTNNEQI LAFLEQKKIRQEWQQLLNEMDMVASQIAELRAAENKLSENIYQHTMELRHFFSDLGINTEPSSNWHYELSIYKKNSEKRQ LAMELISKLEPLAEKQEAYRARLENLKLPIDYTDTEEKITFLRQGLLYYRNHLTENAKLAEKLEQVTMQLDLVKQDLLLV KKEKADLLERANVSNEEDFRMAAMRVKEEQKWRERLVLIEAQLEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQ LHASLAAQNHAIDKLEEGGTFAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQEGKLPKTLKLASEYFNHLTS GNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAIRFALIDVIHKDFPLPIIIDDGFVHFDSSRMGQMMQLLQKR KSENQVIFFTCHQETRKYFSSEDIRVL
Sequences:
>Translated_907_residues MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIHSILFGFPTKQQSIPRMEPKNGGPYGGRLTLEDTPLG KVIIERLKGKATGDVRIYYGDGQTAGEEKLPEIIGEIDRNTYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALL KAAEALQKKLDSLYKPSGRNPLINQQLKKVKEAQQAFQNAKKQNAQYEQLINEKEQAIVRQTELQKEKTTMRVELDALAT LADLWPLYQEWKALSNKASETTEATFPPDGVIRLEHLNLREKEWQNQLIQLEERQKNLISNNNYEHSAFFAENEAEVTYL IETYAAFGEREIQLKNLKQEIKFQQVDTKQPLRIWSSELEQTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEEKLQKKIDQ IEAEMWDNKTFQQAKEKMQDSPKTSKTKTMVSLGIFAVAFVLMIVFQAIWSVALVFVSALIVGYAFITTGKSSPTNNEQI LAFLEQKKIRQEWQQLLNEMDMVASQIAELRAAENKLSENIYQHTMELRHFFSDLGINTEPSSNWHYELSIYKKNSEKRQ LAMELISKLEPLAEKQEAYRARLENLKLPIDYTDTEEKITFLRQGLLYYRNHLTENAKLAEKLEQVTMQLDLVKQDLLLV KKEKADLLERANVSNEEDFRMAAMRVKEEQKWRERLVLIEAQLEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQ LHASLAAQNHAIDKLEEGGTFAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQEGKLPKTLKLASEYFNHLTS GNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAIRFALIDVIHKDFPLPIIIDDGFVHFDSSRMGQMMQLLQKR KSENQVIFFTCHQETRKYFSSEDIRVL >Mature_907_residues MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIHSILFGFPTKQQSIPRMEPKNGGPYGGRLTLEDTPLG KVIIERLKGKATGDVRIYYGDGQTAGEEKLPEIIGEIDRNTYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALL KAAEALQKKLDSLYKPSGRNPLINQQLKKVKEAQQAFQNAKKQNAQYEQLINEKEQAIVRQTELQKEKTTMRVELDALAT LADLWPLYQEWKALSNKASETTEATFPPDGVIRLEHLNLREKEWQNQLIQLEERQKNLISNNNYEHSAFFAENEAEVTYL IETYAAFGEREIQLKNLKQEIKFQQVDTKQPLRIWSSELEQTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEEKLQKKIDQ IEAEMWDNKTFQQAKEKMQDSPKTSKTKTMVSLGIFAVAFVLMIVFQAIWSVALVFVSALIVGYAFITTGKSSPTNNEQI LAFLEQKKIRQEWQQLLNEMDMVASQIAELRAAENKLSENIYQHTMELRHFFSDLGINTEPSSNWHYELSIYKKNSEKRQ LAMELISKLEPLAEKQEAYRARLENLKLPIDYTDTEEKITFLRQGLLYYRNHLTENAKLAEKLEQVTMQLDLVKQDLLLV KKEKADLLERANVSNEEDFRMAAMRVKEEQKWRERLVLIEAQLEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQ LHASLAAQNHAIDKLEEGGTFAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQEGKLPKTLKLASEYFNHLTS GNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAIRFALIDVIHKDFPLPIIIDDGFVHFDSSRMGQMMQLLQKR KSENQVIFFTCHQETRKYFSSEDIRVL
Specific function: Unknown
COG id: COG4717
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 105685; Mature: 105685
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIHSILFGFPTKQQSIPRM CCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC EPKNGGPYGGRLTLEDTPLGKVIIERLKGKATGDVRIYYGDGQTAGEEKLPEIIGEIDRN CCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC TYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALLKAAEALQKKLDSLYKPSGRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PLINQQLKKVKEAQQAFQNAKKQNAQYEQLINEKEQAIVRQTELQKEKTTMRVELDALAT CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH LADLWPLYQEWKALSNKASETTEATFPPDGVIRLEHLNLREKEWQNQLIQLEERQKNLIS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC NNNYEHSAFFAENEAEVTYLIETYAAFGEREIQLKNLKQEIKFQQVDTKQPLRIWSSELE CCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEEKLQKKIDQIEAEMWDNKTFQQAKEKMQD HHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC SPKTSKTKTMVSLGIFAVAFVLMIVFQAIWSVALVFVSALIVGYAFITTGKSSPTNNEQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LAFLEQKKIRQEWQQLLNEMDMVASQIAELRAAENKLSENIYQHTMELRHFFSDLGINTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PSSNWHYELSIYKKNSEKRQLAMELISKLEPLAEKQEAYRARLENLKLPIDYTDTEEKIT CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FLRQGLLYYRNHLTENAKLAEKLEQVTMQLDLVKQDLLLVKKEKADLLERANVSNEEDFR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MAAMRVKEEQKWRERLVLIEAQLEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQ HHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHASLAAQNHAIDKLEEGGTFAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKLPKTLKLASEYFNHLTSGNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAI HCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHH RFALIDVIHKDFPLPIIIDDGFVHFDSSRMGQMMQLLQKRKSENQVIFFTCHQETRKYFS HHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHC SEDIRVL CCCCEEC >Mature Secondary Structure MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIHSILFGFPTKQQSIPRM CCEEEEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC EPKNGGPYGGRLTLEDTPLGKVIIERLKGKATGDVRIYYGDGQTAGEEKLPEIIGEIDRN CCCCCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCC TYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALLKAAEALQKKLDSLYKPSGRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCC PLINQQLKKVKEAQQAFQNAKKQNAQYEQLINEKEQAIVRQTELQKEKTTMRVELDALAT CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHH LADLWPLYQEWKALSNKASETTEATFPPDGVIRLEHLNLREKEWQNQLIQLEERQKNLIS HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC NNNYEHSAFFAENEAEVTYLIETYAAFGEREIQLKNLKQEIKFQQVDTKQPLRIWSSELE CCCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH QTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEEKLQKKIDQIEAEMWDNKTFQQAKEKMQD HHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC SPKTSKTKTMVSLGIFAVAFVLMIVFQAIWSVALVFVSALIVGYAFITTGKSSPTNNEQI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHH LAFLEQKKIRQEWQQLLNEMDMVASQIAELRAAENKLSENIYQHTMELRHFFSDLGINTE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PSSNWHYELSIYKKNSEKRQLAMELISKLEPLAEKQEAYRARLENLKLPIDYTDTEEKIT CCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH FLRQGLLYYRNHLTENAKLAEKLEQVTMQLDLVKQDLLLVKKEKADLLERANVSNEEDFR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH MAAMRVKEEQKWRERLVLIEAQLEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQ HHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHASLAAQNHAIDKLEEGGTFAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQ HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGKLPKTLKLASEYFNHLTSGNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAI HCCCCHHHHHHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCCHHHHHHHHHHHHHHHH RFALIDVIHKDFPLPIIIDDGFVHFDSSRMGQMMQLLQKRKSENQVIFFTCHQETRKYFS HHHHHHHHHCCCCCEEEEECCEEEECCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHC SEDIRVL CCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]