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The map label for this gene is yhaO [H]

Identifier: 226224830

GI number: 226224830

Start: 2317403

End: 2318638

Strand: Reverse

Name: yhaO [H]

Synonym: Lm4b_02249

Alternate gene names: 226224830

Gene position: 2318638-2317403 (Counterclockwise)

Preceding gene: 226224831

Following gene: 226224829

Centisome position: 79.6

GC content: 36.65

Gene sequence:

>1236_bases
ATGAAAGAAATCCAATTTTTACATATGGCTGATTTACATTTAGATAGTCCTTTCATCGGGCTTTCGACACTACCACAGCC
GCTTTTTTCTGCCATACAAGAAAGCACATTTCAATCATTAGAACGAATTACAACTGTGGCGATAAAAGAAGCAGTAGATT
TCGTTTTAATTGCTGGAGATATATATGATAGTGAAGATCAAAGTGTCCGTGCTCAAGCGCGTTTTTCAAAAGAAATGAAA
CGGTTAGAAGTGGCGAACATCCCCGTGTTTATGATTCATGGAAATCATGATTTTATAGAAAAGCATAAAGAAAAACTCAC
ATTACCAAGCAATGTGCACGTTTTTTCAGAGCAAGTAGAAGTAATGTCGCATAAAACCGCCACTGGTGTGAGCGTTAATA
TTTATGGATTTAGTTATAATGAACGTCATATTCGCTCAAGCCGAGTAGATAAATACAAGATTCAAGGTAATGCTGATTTT
CACATTGCGTTATTACATGGCTCAGAAGTATCTAGTAGCGAAGAACATGATGTGTACGCCCCATTTCGTGTACAAGAAAT
TAGCAAAAAAGGTTTTGACTACTGGGCACTAGGTCATATTCATAAGCGACAATTGCTTGCAGAGTCTCCTAGCATTTATT
ACCCGGGAAATATTCAAGGTCGAAATCGCAAAGAATCAGGTGAAAAGGGCGCCAGTATCATTACATTATCAGAAGCAAGT
ACAACCATTGATTTCATTGGAACAAGTCCGATTATTTGGGAAGAAGCTGTAATTACCTTACCAGAAAATAGTGAGATAAA
TGCCTTTTACCGAGAAACTACTAAGTTGTTAGAGAGCTATCAAGGAAGAAGTCACTCTTATTTTCTTCATATAATTGTTA
AGATGGAAAATAAACAAAAAATCGATACGAATGATTGGTTACAAATGCTTCAAGAAGAAGTAGAAATCACAGATAACACA
TTTGTATGGGTACACAAATTAACAACGGAGATAACGAATCAAAGTAATTCACAAACATGGTACGAATCACATTTAGCAGG
AGAAGAAATCAAGCATTCGTTTGAGACACTACAAGATGAATCTGCTTTTTATCAAGCAGTAGAGGCTCTGTATCTTGAAA
GTGGAGTGAGTAGATACTTGGATGATTTGTCTGAAATTGATCGTGAGAGGCTACTACATGATGCTTTAATGGAATTAGGG
AGGACGCTTGCAGAAGTGGAAGGTGATGATAAATGA

Upstream 100 bases:

>100_bases
GCAGATAATAGGGTCATTTTTTTATTGGAAATGCTTGTACCTAACGTAATAGTAAGATATAATAAGAACGTATATTCGGT
TTTTATAGGAGGCGAAAGTC

Downstream 100 bases:

>100_bases
GAATAACATCTATTGATATCATTGGTTACGGAAAATGGTCCGATGCTCATTTTAATAATATTGCCAATTTCCAAGTATTC
TATGGTGAAAATGAAGCCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQSVRAQARFSKEMK
RLEVANIPVFMIHGNHDFIEKHKEKLTLPSNVHVFSEQVEVMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADF
HIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNIQGRNRKESGEKGASIITLSEAS
TTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKLLESYQGRSHSYFLHIIVKMENKQKIDTNDWLQMLQEEVEITDNT
FVWVHKLTTEITNQSNSQTWYESHLAGEEIKHSFETLQDESAFYQAVEALYLESGVSRYLDDLSEIDRERLLHDALMELG
RTLAEVEGDDK

Sequences:

>Translated_411_residues
MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQSVRAQARFSKEMK
RLEVANIPVFMIHGNHDFIEKHKEKLTLPSNVHVFSEQVEVMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADF
HIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNIQGRNRKESGEKGASIITLSEAS
TTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKLLESYQGRSHSYFLHIIVKMENKQKIDTNDWLQMLQEEVEITDNT
FVWVHKLTTEITNQSNSQTWYESHLAGEEIKHSFETLQDESAFYQAVEALYLESGVSRYLDDLSEIDRERLLHDALMELG
RTLAEVEGDDK
>Mature_411_residues
MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGDIYDSEDQSVRAQARFSKEMK
RLEVANIPVFMIHGNHDFIEKHKEKLTLPSNVHVFSEQVEVMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADF
HIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNIQGRNRKESGEKGASIITLSEAS
TTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKLLESYQGRSHSYFLHIIVKMENKQKIDTNDWLQMLQEEVEITDNT
FVWVHKLTTEITNQSNSQTWYESHLAGEEIKHSFETLQDESAFYQAVEALYLESGVSRYLDDLSEIDRERLLHDALMELG
RTLAEVEGDDK

Specific function: Unknown

COG id: COG0420

COG function: function code L; DNA repair exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallophosphoesterase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004843
- InterPro:   IPR014576 [H]

Pfam domain/function: PF00149 Metallophos [H]

EC number: NA

Molecular weight: Translated: 47110; Mature: 47110

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGD
CCCCEEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
IYDSEDQSVRAQARFSKEMKRLEVANIPVFMIHGNHDFIEKHKEKLTLPSNVHVFSEQVE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHH
VMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADFHIALLHGSEVSSSEEHDVYA
HHHCCCCCCEEEEEEEEECCHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCC
PFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNIQGRNRKESGEKGASIITLSEAS
CHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCC
TTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKLLESYQGRSHSYFLHIIVKMENKQK
CEEEECCCCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
IDTNDWLQMLQEEVEITDNTFVWVHKLTTEITNQSNSQTWYESHLAGEEIKHSFETLQDE
CCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHH
SAFYQAVEALYLESGVSRYLDDLSEIDRERLLHDALMELGRTLAEVEGDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERITTVAIKEAVDFVLIAGD
CCCCEEEEEECCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
IYDSEDQSVRAQARFSKEMKRLEVANIPVFMIHGNHDFIEKHKEKLTLPSNVHVFSEQVE
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHCCCCCCCHHHHHHHH
VMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADFHIALLHGSEVSSSEEHDVYA
HHHCCCCCCEEEEEEEEECCHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCC
PFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNIQGRNRKESGEKGASIITLSEAS
CHHHHHHHHCCCCEEEHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEEEEECCC
TTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKLLESYQGRSHSYFLHIIVKMENKQK
CEEEECCCCCEEECCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCC
IDTNDWLQMLQEEVEITDNTFVWVHKLTTEITNQSNSQTWYESHLAGEEIKHSFETLQDE
CCHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHH
SAFYQAVEALYLESGVSRYLDDLSEIDRERLLHDALMELGRTLAEVEGDDK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]