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The map label for this gene is yhgC [H]

Identifier: 226224821

GI number: 226224821

Start: 2308461

End: 2308964

Strand: Direct

Name: yhgC [H]

Synonym: Lm4b_02240

Alternate gene names: 226224821

Gene position: 2308461-2308964 (Clockwise)

Preceding gene: 226224812

Following gene: 226224824

Centisome position: 79.26

GC content: 34.72

Gene sequence:

>504_bases
ATGAAAAAAGTATTTATCACGACTGGAACGGAGCACTATCTTCGTCAATTAATGGCAAATTATACTGGCGGAAATGTGAC
ACTTCTACAAAACTTTTCCCAATCACTTTTGTATCAAGAGTCGACTGGTGAAAAACTTTTCCAAGAAGGCGCTGAGTATC
GAGTATTGCAAAGCAGTGGTTCCTTAAAAGGTTTTGGAGTAGTCGTCTTTGAATATATCCACCTCCGCGATGAAGAAATC
CCTATTTTCTTGCAAATGTATCAACGAGCGAGTCTGCATTTTAGTGAAACGCCTGGCTTGCAAAGTACAAAACTCACAAA
AGCGATGAATATGAATAAATTTTTAATTATTTCCTTTTGGGATTCTGAAGTATTTTTTCATGACTGGAAAAAAACACCTT
TATCCAAAGAAATTACCAATATCATGAAAAAAAATAATACTCAATCTGGATTCTCACATGAAGATATTTATCATTATCCA
GAATTTTCCCATGATGCTAAATAG

Upstream 100 bases:

>100_bases
CCAAACAAATTGCCTATCAGCTGTTTCAATTATGAAAAACGTGGAAAATAAAGGTGTAATCATTTTTCTTAATGGAATAA
AACTGAAAGAAGGACTTATT

Downstream 100 bases:

>100_bases
GAAAAAGCGATTTGGACCACTCATCCAAATCGCTTTTTTTATTCGTACATTTTTTTCATTCTGACTGGTGCATAAAGGAA
CGTAAAGATAACTACAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSLKGFGVVVFEYIHLRDEEI
PIFLQMYQRASLHFSETPGLQSTKLTKAMNMNKFLIISFWDSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYP
EFSHDAK

Sequences:

>Translated_167_residues
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSLKGFGVVVFEYIHLRDEEI
PIFLQMYQRASLHFSETPGLQSTKLTKAMNMNKFLIISFWDSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYP
EFSHDAK
>Mature_167_residues
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSGSLKGFGVVVFEYIHLRDEEI
PIFLQMYQRASLHFSETPGLQSTKLTKAMNMNKFLIISFWDSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYP
EFSHDAK

Specific function: Unknown

COG id: COG2329

COG function: function code R; Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007138
- InterPro:   IPR011008 [H]

Pfam domain/function: PF03992 ABM [H]

EC number: NA

Molecular weight: Translated: 19452; Mature: 19452

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSG
CCEEEEECCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCC
SLKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQSTKLTKAMNMNKFLIISFW
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEEE
DSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYPEFSHDAK
CCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKVFITTGTEHYLRQLMANYTGGNVTLLQNFSQSLLYQESTGEKLFQEGAEYRVLQSSG
CCEEEEECCHHHHHHHHHHHCCCCCEEEHHHHHHHHHCCCCCHHHHHHCCCCEEEEECCC
SLKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQSTKLTKAMNMNKFLIISFW
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCEEEEEEEE
DSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYPEFSHDAK
CCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8335642; 9579061; 9384377 [H]