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The map label for this gene is ypjC [H]

Identifier: 226224513

GI number: 226224513

Start: 1969640

End: 1970506

Strand: Direct

Name: ypjC [H]

Synonym: Lm4b_01926

Alternate gene names: 226224513

Gene position: 1969640-1970506 (Clockwise)

Preceding gene: 226224496

Following gene: 226224515

Centisome position: 67.62

GC content: 41.52

Gene sequence:

>867_bases
ATGCTAAAAACATTACGCACGAAAAATATTTGCTTTATTATGCTTGGTACGGCGATTTATGCATTTGGATTAGTAAATTT
TAATATCGCGAATAACCTCGGTGAAGGCGGTTTAGCTGGAGTAACCTTATTCCTTCTTCACTTCTTCCAAATTGATCCAG
CGTACTCTAACTTAATTTTAAATATACCTTTGTTTATATTAGGTTGGCGAGTTCTAGGCAATCGTTCCCTCATTTATACG
GGTATCGGAACGGTGAGTTTGTCCTTATTTTTATGGATTTTCCAGCGAATACCTTATACGCTAGATTTACATAGCGATTT
ACTTTTAGTCGCCCTTTTTGCTGGTGGCTTTAGTGGTATTGGGCTTGGCCTCGTGTTTCGCTACGGTGGGACGACTGGTG
GTAGTGATATTATCGCCAAACTGCTAAATCATACGAAAGGCATTAGCATGGGGCGCACGCTATTTGCTATTGATGCAATT
GTTCTCGTTGCCTCACTCTCCTATTTAGATGTCCGTCAAGTTATGTACACGCTCGTCGCCGTATTCATCGGCTCTCGCGT
AATTGATTTTGTTCAAGAAGGAGCTTATGCGGCTCGCGGTGCGCTCATTATTTCTAAAGATAATGACGCGATTGCTTCCC
ATGTGATGCTCGCGATGAATCGCGGGGTAACAGTGTTGGAAGGTCGCGGTGGCTTCTCTAAAAAAGACCAAGACGTCCTT
TATATCGTCGTTGCGAAAAATGAAATAATTCAATTAAAAAATATTGTTCAAGCAATTGACCCACATGCCTTTGTTTCCGT
CAGTGTCGTTCATGATGTGATGGGAGAAGGTTTCACACTCGATGAAAACAAGAATCCTATCTACTAA

Upstream 100 bases:

>100_bases
AGACTAATTGTTAACTTCATTTCATTATACCTAAACAAATACGTCCAAGTCCATGATTTTTTACTTACATATTAAATAGG
TTTCAGGGAGGAAAAAAGCT

Downstream 100 bases:

>100_bases
TGTATTTACTTGGCTCATAGTTTTCTAAAGCCAAATCGACGGTGTTTCCAAGTGCTAAATCCGCTAAAAGTTTGCCAACA
TAAGGCCCGGTAGTTAAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLFLLHFFQIDPAYSNLILNIPLFILGWRVLGNRSLIYT
GIGTVSLSLFLWIFQRIPYTLDLHSDLLLVALFAGGFSGIGLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAI
VLVASLSYLDVRQVMYTLVAVFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLAMNRGVTVLEGRGGFSKKDQDVL
YIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGEGFTLDENKNPIY

Sequences:

>Translated_288_residues
MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLFLLHFFQIDPAYSNLILNIPLFILGWRVLGNRSLIYT
GIGTVSLSLFLWIFQRIPYTLDLHSDLLLVALFAGGFSGIGLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAI
VLVASLSYLDVRQVMYTLVAVFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLAMNRGVTVLEGRGGFSKKDQDVL
YIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGEGFTLDENKNPIY
>Mature_288_residues
MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLFLLHFFQIDPAYSNLILNIPLFILGWRVLGNRSLIYT
GIGTVSLSLFLWIFQRIPYTLDLHSDLLLVALFAGGFSGIGLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAI
VLVASLSYLDVRQVMYTLVAVFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLAMNRGVTVLEGRGGFSKKDQDVL
YIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGEGFTLDENKNPIY

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 31352; Mature: 31352

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLFLLHFFQIDPAYSNLIL
CCCCCCCCCEEEEEHHHHHHHHHHHEEEHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
NIPLFILGWRVLGNRSLIYTGIGTVSLSLFLWIFQRIPYTLDLHSDLLLVALFAGGFSGI
CCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCC
GLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAIVLVASLSYLDVRQVMYTLVA
CEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLAMNRGVTVLEGRGGFSKKDQDVL
HHHHHHHHHHHHCCCHHHCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE
YIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGEGFTLDENKNPIY
EEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCC
>Mature Secondary Structure
MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLFLLHFFQIDPAYSNLIL
CCCCCCCCCEEEEEHHHHHHHHHHHEEEHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHH
NIPLFILGWRVLGNRSLIYTGIGTVSLSLFLWIFQRIPYTLDLHSDLLLVALFAGGFSGI
CCHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHCCCCCC
GLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAIVLVASLSYLDVRQVMYTLVA
CEEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLAMNRGVTVLEGRGGFSKKDQDVL
HHHHHHHHHHHHCCCHHHCCEEEEECCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEE
YIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGEGFTLDENKNPIY
EEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]