| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224320
Identifier: 226224320
GI number: 226224320
Start: 1764835
End: 1765902
Strand: Reverse
Name: 226224320
Synonym: Lm4b_01731
Alternate gene names: NA
Gene position: 1765902-1764835 (Counterclockwise)
Preceding gene: 226224321
Following gene: 226224318
Centisome position: 60.63
GC content: 28.65
Gene sequence:
>1068_bases ATGAAAATGGATAGTGAAACACTATTATTAGATGTAAAGAAATTAGGGGAAAGAGTATCTGCGCTTAAGGATTCGATAGC TACAGAAGAAGCGACGAAAACATCATTAATTATGCCCTTTTTTCAACTGTTAGGATATGATGTTTTTAATCCACTCGAAT TTTCACCAGAGTATATTGCGGATGTAGGGATAAAAAAAGGAGAGAAAGTAGATTATGCTATTTTAAATAATAACAATCCT ATTATCCTAATTGAAGCGAAATCTATTAAATCTGATTTAAAAAACCATGATTCGCAATTGTTTAGATATTTTGGAACTAC AACAGCAAAATTCGGCATTTTAACTAACGGTAATGAATATCGATTCTATACTGATTTGGAAGAACCAAACAAGATGGATA AAACGCCATTCTTTTCCTTTGTACTTACAGAAATAAAAGATGTTCAAATTTCTGAAATTTTTAAATTCCAAAAAGAAAAT TTTGATGTAGAGAATATTTCTAAAGCTGCTTCTGATTTAAAATATCTTAATTTTGTCAAAGAATTTTTAACTAAAGAAGT TAATGATCCAAGCGAAGAATTTGTTAAATTTATTCTTGGCGAAATTTATGACGGAATAAAAACAAAAGTAATTATCGATA AATTCACACCTGTTGTAAAAAGGGGATTTCGACAATTTATTGCAGACCAAGTGAATAGTAAACTAAATGCTGCACTTAAT ACATCTGTTTCAGTAGAAGAGTTAGAAGTTCCTCAAGTAGAAGCAAATGCTGAAGAGGAAGAAGATATTATTACAACAGA AGCAGAAATTGAAGCATTCACGACAACTAAATTATTATTGAAAGATACTATTGATACATCTAGAATTTTTTATAGAGATA ATAAATCGTACTTCAATATAATTATAGATAACAGTATAAGAAAATGGGTTTTAAGATTATACATTAATAATGCAAGAACC TATTTTGTAATAAATGACGAAGAGAAAACTACGATAGAAATTGTTGATGTGATTGATATTTTCAATCATGCGGATAAAAT CATTCCTGTAGTCGAGAGATACTTATAA
Upstream 100 bases:
>100_bases ATAAATAGACGTATAAAGAAATATATATTACACTTAACTAAATGGAAAGGTTGTTCCATTTAAAAATAAATGTGAATAAT AATACATAAAATAGGAGACG
Downstream 100 bases:
>100_bases TACAAAAGTCTACTTAAAAAGGACCAATAAGATTGGCATATTCTTTGTCAATCTTATTGGTCCCTTTCATTTTTAATATT ATTTCCCAATCAACCCATAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MKMDSETLLLDVKKLGERVSALKDSIATEEATKTSLIMPFFQLLGYDVFNPLEFSPEYIADVGIKKGEKVDYAILNNNNP IILIEAKSIKSDLKNHDSQLFRYFGTTTAKFGILTNGNEYRFYTDLEEPNKMDKTPFFSFVLTEIKDVQISEIFKFQKEN FDVENISKAASDLKYLNFVKEFLTKEVNDPSEEFVKFILGEIYDGIKTKVIIDKFTPVVKRGFRQFIADQVNSKLNAALN TSVSVEELEVPQVEANAEEEEDIITTEAEIEAFTTTKLLLKDTIDTSRIFYRDNKSYFNIIIDNSIRKWVLRLYINNART YFVINDEEKTTIEIVDVIDIFNHADKIIPVVERYL
Sequences:
>Translated_355_residues MKMDSETLLLDVKKLGERVSALKDSIATEEATKTSLIMPFFQLLGYDVFNPLEFSPEYIADVGIKKGEKVDYAILNNNNP IILIEAKSIKSDLKNHDSQLFRYFGTTTAKFGILTNGNEYRFYTDLEEPNKMDKTPFFSFVLTEIKDVQISEIFKFQKEN FDVENISKAASDLKYLNFVKEFLTKEVNDPSEEFVKFILGEIYDGIKTKVIIDKFTPVVKRGFRQFIADQVNSKLNAALN TSVSVEELEVPQVEANAEEEEDIITTEAEIEAFTTTKLLLKDTIDTSRIFYRDNKSYFNIIIDNSIRKWVLRLYINNART YFVINDEEKTTIEIVDVIDIFNHADKIIPVVERYL >Mature_355_residues MKMDSETLLLDVKKLGERVSALKDSIATEEATKTSLIMPFFQLLGYDVFNPLEFSPEYIADVGIKKGEKVDYAILNNNNP IILIEAKSIKSDLKNHDSQLFRYFGTTTAKFGILTNGNEYRFYTDLEEPNKMDKTPFFSFVLTEIKDVQISEIFKFQKEN FDVENISKAASDLKYLNFVKEFLTKEVNDPSEEFVKFILGEIYDGIKTKVIIDKFTPVVKRGFRQFIADQVNSKLNAALN TSVSVEELEVPQVEANAEEEEDIITTEAEIEAFTTTKLLLKDTIDTSRIFYRDNKSYFNIIIDNSIRKWVLRLYINNART YFVINDEEKTTIEIVDVIDIFNHADKIIPVVERYL
Specific function: Unknown
COG id: COG4748
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40996; Mature: 40996
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMDSETLLLDVKKLGERVSALKDSIATEEATKTSLIMPFFQLLGYDVFNPLEFSPEYIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DVGIKKGEKVDYAILNNNNPIILIEAKSIKSDLKNHDSQLFRYFGTTTAKFGILTNGNEY HCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE RFYTDLEEPNKMDKTPFFSFVLTEIKDVQISEIFKFQKENFDVENISKAASDLKYLNFVK EEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EFLTKEVNDPSEEFVKFILGEIYDGIKTKVIIDKFTPVVKRGFRQFIADQVNSKLNAALN HHHHHCCCCCHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSVSVEELEVPQVEANAEEEEDIITTEAEIEAFTTTKLLLKDTIDTSRIFYRDNKSYFNI CCCCHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEE IIDNSIRKWVLRLYINNARTYFVINDEEKTTIEIVDVIDIFNHADKIIPVVERYL EEECHHHHHHHHHEEECCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKMDSETLLLDVKKLGERVSALKDSIATEEATKTSLIMPFFQLLGYDVFNPLEFSPEYIA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DVGIKKGEKVDYAILNNNNPIILIEAKSIKSDLKNHDSQLFRYFGTTTAKFGILTNGNEY HCCCCCCCCEEEEEEECCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCE RFYTDLEEPNKMDKTPFFSFVLTEIKDVQISEIFKFQKENFDVENISKAASDLKYLNFVK EEEECCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH EFLTKEVNDPSEEFVKFILGEIYDGIKTKVIIDKFTPVVKRGFRQFIADQVNSKLNAALN HHHHHCCCCCHHHHHHHHHHHHHCCHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TSVSVEELEVPQVEANAEEEEDIITTEAEIEAFTTTKLLLKDTIDTSRIFYRDNKSYFNI CCCCHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEE IIDNSIRKWVLRLYINNARTYFVINDEEKTTIEIVDVIDIFNHADKIIPVVERYL EEECHHHHHHHHHEEECCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA