| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224318
Identifier: 226224318
GI number: 226224318
Start: 1763328
End: 1763996
Strand: Reverse
Name: 226224318
Synonym: Lm4b_01729
Alternate gene names: NA
Gene position: 1763996-1763328 (Counterclockwise)
Preceding gene: 226224320
Following gene: 226224317
Centisome position: 60.56
GC content: 32.29
Gene sequence:
>669_bases ATGACGAAAATAACAAAAAGAAAGAAAATAACACTAATCATTTTGGGAGGTATCATCGGTTTGAGTTTTATTTTATATAA ACCATTAATTAACTATTTAAGCGAACAAGCGGCGAATCCGCGTGGGATTATTGGTGAAATCACTACGAAAATATGGTCAT CCTATTTTGAAGATTTGAGTAAGTGGACAATTAGTAATACTGAACTAAGCAATGTTACACAGGTATTAGATATTGGTTAT GGTGGGGGCTCCAATGTTAAAAACCTAGCGGAGCTAAATAAAAATTGGACTATTTACGGAGTGGATATTTCTGAAGAATC TTATAAAACAGCCACAAATTTGAATAAAAAAGCAATCAATAATGGCAAAGTAGAGCTATCTGTACAAGATGTTGCATCGA TGAATTATCAAGCAGGTATTTTCGATGTAGTTTATGCTATACAAACCCATATGTATTGGGATAATCCTAAAAAAGGGTTT GAAGAAATCTATCGGGTAATGTCACAAAAAGGTGTTTTAATAGTGTCGTCTGAAAAAGATAAAATTGATTATCATATGGA CGAATATAAAACAACTGCCACTCTAACAGTACTCTTAAAAGAAATTGGCTTTAGAGAAGTAGTGGAGAAAGAAAAGGGAA ATTGGGTTTTGTATACAATCAGAAAATAA
Upstream 100 bases:
>100_bases TTCAAAAGTTATTGACTTGCAAGTTAAGATTATTATACAATTGTTTTGAAATATAGTTAAAATTATTTCAAAACTAAACA CCCATGAAAGGACTTTAATT
Downstream 100 bases:
>100_bases TTGCGAGTTATATTATCTTTTGAAATATCTGTTACAATGAATAAAACTCTCTAATACAGAGTCCAATTTTATACATCATG AGGTGAAAACATGTTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Methyltransferase Type; SAM-Dependent Methyltransferase; Methyltransferase UbiE/COQ5 Family; Methyl Transferase; SAM-Dependent Methyltransferase UbiE Family; Methyltransferase Domain Protein; Methyltransferase Domain-Containing Protein; Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Sam-Dependent Methyltransferase; Multidrug Resistance Protein; Methyltransferase Domain Family; UbiE/COQ5 Methyltransferase; SAM Dependent Methyltransferase YrrH; UbiE/COQ5 Family Methyltransferase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTKITKRKKITLIILGGIIGLSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLSKWTISNTELSNVTQVLDIGY GGGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAINNGKVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGF EEIYRVMSQKGVLIVSSEKDKIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK
Sequences:
>Translated_222_residues MTKITKRKKITLIILGGIIGLSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLSKWTISNTELSNVTQVLDIGY GGGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAINNGKVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGF EEIYRVMSQKGVLIVSSEKDKIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK >Mature_221_residues TKITKRKKITLIILGGIIGLSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLSKWTISNTELSNVTQVLDIGYG GGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAINNGKVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGFE EIYRVMSQKGVLIVSSEKDKIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25255; Mature: 25124
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKITKRKKITLIILGGIIGLSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLS CCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KWTISNTELSNVTQVLDIGYGGGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAIN HHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEECCCHHHHHHCCCHHHCC NGKVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGFEEIYRVMSQKGVLIVSSEKD CCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEECCCC KIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEECC >Mature Secondary Structure TKITKRKKITLIILGGIIGLSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLS CCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH KWTISNTELSNVTQVLDIGYGGGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAIN HHCCCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEEECCCHHHHHHCCCHHHCC NGKVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGFEEIYRVMSQKGVLIVSSEKD CCEEEEEHHHHHHCCCCCHHHHHHHHHHHHHEECCHHHHHHHHHHHHHCCCEEEEECCCC KIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK CCCHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA