| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226224249
Identifier: 226224249
GI number: 226224249
Start: 1680642
End: 1681157
Strand: Reverse
Name: 226224249
Synonym: Lm4b_01659
Alternate gene names: NA
Gene position: 1681157-1680642 (Counterclockwise)
Preceding gene: 226224250
Following gene: 226224247
Centisome position: 57.72
GC content: 39.34
Gene sequence:
>516_bases TTGAAAAAATGGTTATTAGTAGTTTTAACTTTAGCACTAGGATTGTCGCTTGCGGCTTGTTCCGGTTCTAACAGTTCTGA CAAAAAAGAAGACACAAAAAAAGAAACAACAAGTGATAAAGACAAAGTACTAAATTATTACATGGACTTAGTAGACGTTG TTAATGAAAACAATGGCGATTACAACGCTTATGTAGGAGCAGTTGGCGCAGATCCTAAACCATCTGAAGCAGACCTTGCA GCTCTTGCGAAACCAGCTAGTGAATCAGCACTTAAAGTATCTGAAGCACTTGCTAGTGAAAAAACACCAGACCTTGGTAA ATCCACAGATGATTTCAAAGCAGCTGTGAAACAATTAAGTGATGCTTACAAATTAGAAGCAGACGCACTTAAAGCTAGTG GTCGTGATACAACAAAAGCAGACGAAGCGATGGCAAAAGCGGACGAAGCAATTGCTGGCGTATTAAAAGATGCTGGACTT AATCCTTCAAGCATTACAACTGATACAGCTTCCTGA
Upstream 100 bases:
>100_bases AGTAATGTTACTTGCCGGATGGGTGAAGCATATCCGAGACTGACGCGGCCAGTTACAAAAGGGCTTCCGAGTTTGGCTTG AAAAAAAGGAGGACATCATC
Downstream 100 bases:
>100_bases TAATAAAAAAGACAGTTTCCTAATGGAAGCTGTCTTTTTTATTATTTATTTTTTGTTTGATTAATTTCATTTTGAAGTTG TTCAAAAGTCGCCATTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVLNYYMDLVDVVNENNGDYNAYVGAVGADPKPSEADLA ALAKPASESALKVSEALASEKTPDLGKSTDDFKAAVKQLSDAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGL NPSSITTDTAS
Sequences:
>Translated_171_residues MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVLNYYMDLVDVVNENNGDYNAYVGAVGADPKPSEADLA ALAKPASESALKVSEALASEKTPDLGKSTDDFKAAVKQLSDAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGL NPSSITTDTAS >Mature_171_residues MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVLNYYMDLVDVVNENNGDYNAYVGAVGADPKPSEADLA ALAKPASESALKVSEALASEKTPDLGKSTDDFKAAVKQLSDAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGL NPSSITTDTAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17837; Mature: 17837
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVLNYYMDLVDVVNENNGD CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC YNAYVGAVGADPKPSEADLAALAKPASESALKVSEALASEKTPDLGKSTDDFKAAVKQLS EEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH DAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGLNPSSITTDTAS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVLNYYMDLVDVVNENNGD CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC YNAYVGAVGADPKPSEADLAALAKPASESALKVSEALASEKTPDLGKSTDDFKAAVKQLS EEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH DAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGLNPSSITTDTAS HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA