| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is ytxG [H]
Identifier: 226224203
GI number: 226224203
Start: 1629664
End: 1630119
Strand: Reverse
Name: ytxG [H]
Synonym: Lm4b_01613
Alternate gene names: 226224203
Gene position: 1630119-1629664 (Counterclockwise)
Preceding gene: 226224205
Following gene: 226224202
Centisome position: 55.97
GC content: 36.4
Gene sequence:
>456_bases ATGATAGTAATCTTGTATATTGCAGCGCTTATTGCCGCAATTGCGCTTTTAGTTATTGCCATCTACTTGGGAAAAACGTT AAAATCAACTTCCCAAACAATGGATGAGGTAGCTAAATCGTTAGAAAAAATAACAGTAGAAGTACAAGGGATTACAGGAC AATCACAAAAATTGCTTGATAAGACCAATACACTTCTAGAAGATGTAAATGGCAAAGTTGCGAAAGTGGATCCAGTTTTT GATGCAGTTGGTGACATTGGGACTTCTTTACTAGGATTAAGTCAATCTGTTCGCGAACTAGCAACACTCGCAACAAACAA AGTAGAGCAAAACGAAGCGAAGATTTCTCAAGCTGTCTCAATTAGCAATTCAATTCTTTCTTTTAGAGAAAAGATGAAAG CAAATAAAGCAGCGAAAGAAGCAGCAAAAGAAGCAGCAGAACAATCTAATTTCTAA
Upstream 100 bases:
>100_bases TACCTTTTCTTTTTTGTATTTTGTACATAGATCATTAGAGAAGAAAGTTTTAGAGGGGAATACTCAGGGTATAGAAAAAG GAATATGGAGGTGTGGATAG
Downstream 100 bases:
>100_bases TATAATTTGGAGGGATTTAACATGGCAGAAAAAGATGGTATTAATACAAAAGATTTTCTAATCGGTGGTTTAATTGGTGC AATCGTTGGTTCAGCCGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVF DAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAAEQSNF
Sequences:
>Translated_151_residues MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVF DAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAAEQSNF >Mature_151_residues MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVF DAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAAEQSNF
Specific function: Unknown
COG id: COG4768
COG function: function code R; Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0478 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009293 [H]
Pfam domain/function: PF06103 DUF948 [H]
EC number: NA
Molecular weight: Translated: 16094; Mature: 16094
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH KTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVS HHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISNSILSFREKMKANKAAKEAAKEAAEQSNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKITVEVQGITGQSQKLLD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHH KTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELATLATNKVEQNEAKISQAVS HHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISNSILSFREKMKANKAAKEAAKEAAEQSNF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8733232; 9387221; 9384377 [H]