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The map label for this gene is ytxH [H]

Identifier: 226224202

GI number: 226224202

Start: 1629118

End: 1629642

Strand: Reverse

Name: ytxH [H]

Synonym: Lm4b_01612

Alternate gene names: 226224202

Gene position: 1629642-1629118 (Counterclockwise)

Preceding gene: 226224203

Following gene: 226224201

Centisome position: 55.95

GC content: 36.95

Gene sequence:

>525_bases
ATGGCAGAAAAAGATGGTATTAATACAAAAGATTTTCTAATCGGTGGTTTAATTGGTGCAATCGTTGGTTCAGCCGCAGC
ACTTCTATTTGCACCTAAATCAGGTAAAGAACTACGCGAGGACTTAAATACACAAGTTGATACAATTAAAGAAAAAGGCA
ACCAATGGAAAGATGTTGCTTATGAAAAAGGTATCGAAATCAGTGGTGTAGCCAAAGGAACAAAAGATAAATTAGTTGAT
TCTGCTGGTGGATTTGCAGATGTAGTGAAAGACAAATCCGGTAAATTAGCAGATACTGTTTCTAAACAAAGTAAAGCCGT
GAAAGAAGTTGTTTCACAAAACAAAGAAGAAAATCAAGAAGCTGCGAAACAAGCGGCAGACGCTGTGAAAAATGAAGCAA
AAGACGCTGCGGACGATGTAGAAAAAGCAGCTGACAAAGCGAAAAAAGAAGCAAAAAAAGCAGTAGATGAAGGCAAAGAC
GAAGCGAAAAAAATTGCTTCTGACGTGAAAAAAGAAGTAAAATAA

Upstream 100 bases:

>100_bases
TTCTTTTAGAGAAAAGATGAAAGCAAATAAAGCAGCGAAAGAAGCAGCAAAAGAAGCAGCAGAACAATCTAATTTCTAAT
ATAATTTGGAGGGATTTAAC

Downstream 100 bases:

>100_bases
ACTTAGTTCAAAAAACAGCCTTACGGGGCTGTTTTTTTATTAGGAAAAAATACATTATCTGCTTGTAATTTGATTTAAAA
CATGTTAACATTAGTTTTAC

Product: general stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MAEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNTQVDTIKEKGNQWKDVAYEKGIEISGVAKGTKDKLVD
SAGGFADVVKDKSGKLADTVSKQSKAVKEVVSQNKEENQEAAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKD
EAKKIASDVKKEVK

Sequences:

>Translated_174_residues
MAEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNTQVDTIKEKGNQWKDVAYEKGIEISGVAKGTKDKLVD
SAGGFADVVKDKSGKLADTVSKQSKAVKEVVSQNKEENQEAAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKD
EAKKIASDVKKEVK
>Mature_173_residues
AEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNTQVDTIKEKGNQWKDVAYEKGIEISGVAKGTKDKLVDS
AGGFADVVKDKSGKLADTVSKQSKAVKEVVSQNKEENQEAAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKDE
AKKIASDVKKEVK

Specific function: Unknown

COG id: COG4980

COG function: function code R; Gas vesicle protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To C.plantagineum desiccation-related protein clone PCC3-06 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18418; Mature: 18287

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNTQVDTIKEKGNQWKDVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
YEKGIEISGVAKGTKDKLVDSAGGFADVVKDKSGKLADTVSKQSKAVKEVVSQNKEENQE
HHCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
AAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKDEAKKIASDVKKEVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNTQVDTIKEKGNQWKDVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH
YEKGIEISGVAKGTKDKLVDSAGGFADVVKDKSGKLADTVSKQSKAVKEVVSQNKEENQE
HHCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
AAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKDEAKKIASDVKKEVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8733232; 9387221; 9384377 [H]