| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yteJ [H]
Identifier: 226224185
GI number: 226224185
Start: 1609761
End: 1610297
Strand: Reverse
Name: yteJ [H]
Synonym: Lm4b_01595
Alternate gene names: 226224185
Gene position: 1610297-1609761 (Counterclockwise)
Preceding gene: 226224186
Following gene: 226224184
Centisome position: 55.29
GC content: 37.43
Gene sequence:
>537_bases ATGGCTAATGAAAATGTTACTTTTGAAAGTAAACGCCAAGTCTATCATTATGAACCACCAATTCAGAAAGAAGAAGCCAT TCCTAAACAGTACTTTGCTGGCTTTTGGATCCGGTTTTTAGCTTATTTAGTCGATTTAGTTGTCATCGCAGCCTTGAAGG GAATCATTATTAATCCGATTTTCCGCGTTTCTGGAATGGGGATGGATGACAGTTTCTTCACATTTTATTGGGGAATGACA ACGATTATCTTTTTAGCTTACTTTATTCTGCTTACTAAGTTTTTCGGACAAACGCTTGGAAAAATGTTATTTGGTCTTCG CGTAGTGAAACTTGATGGCGAAAAATTAACTTGGTTAACCGTTTTATTTCGAGAAGGTGCGATGCGTTTTGTCTTAAAAA CAATTTGGCCGTTATATGTGGTTTGTGCCTTTACACCAAACAAACAAGGCATTGCGGACTTTTTTGAATCCACATCTGTC GTCCACACGGGCTACTTAGAACTAGATGAAAAATGGGTAAATGGAGCAAAAAAATAG
Upstream 100 bases:
>100_bases CAAAATGCAGATATTTCCCAACTAATCAAATTAACTGGCACACTTAAAGCGCCAAGAATGATGTATTTATATGGAGAATA ATGTGAGAGGAGAGGCGCAC
Downstream 100 bases:
>100_bases CTTATAGCAAACTTCTTCTTTAAAATGGAATAGAAGCGTCCATTAAAGGAGGAAGAAAAAATGACTCAAGTAACATTTAA ACATAATCCAGTTACACTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MANENVTFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLVDLVVIAALKGIIINPIFRVSGMGMDDSFFTFYWGMT TIIFLAYFILLTKFFGQTLGKMLFGLRVVKLDGEKLTWLTVLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSV VHTGYLELDEKWVNGAKK
Sequences:
>Translated_178_residues MANENVTFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLVDLVVIAALKGIIINPIFRVSGMGMDDSFFTFYWGMT TIIFLAYFILLTKFFGQTLGKMLFGLRVVKLDGEKLTWLTVLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSV VHTGYLELDEKWVNGAKK >Mature_177_residues ANENVTFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLVDLVVIAALKGIIINPIFRVSGMGMDDSFFTFYWGMTT IIFLAYFILLTKFFGQTLGKMLFGLRVVKLDGEKLTWLTVLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSVV HTGYLELDEKWVNGAKK
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RDD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010432 [H]
Pfam domain/function: PF06271 RDD [H]
EC number: NA
Molecular weight: Translated: 20615; Mature: 20483
Theoretical pI: Translated: 9.25; Mature: 9.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANENVTFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLVDLVVIAALKGIIINPI CCCCCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRVSGMGMDDSFFTFYWGMTTIIFLAYFILLTKFFGQTLGKMLFGLRVVKLDGEKLTWLT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHH VLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSVVHTGYLELDEKWVNGAKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECHHHHHHHHCCCCCC >Mature Secondary Structure ANENVTFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLVDLVVIAALKGIIINPI CCCCCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FRVSGMGMDDSFFTFYWGMTTIIFLAYFILLTKFFGQTLGKMLFGLRVVKLDGEKLTWLT HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHH VLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSVVHTGYLELDEKWVNGAKK HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCEEECHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]