| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224096
Identifier: 226224096
GI number: 226224096
Start: 1510450
End: 1511073
Strand: Reverse
Name: 226224096
Synonym: Lm4b_01505
Alternate gene names: NA
Gene position: 1511073-1510450 (Counterclockwise)
Preceding gene: 226224097
Following gene: 226224095
Centisome position: 51.88
GC content: 37.66
Gene sequence:
>624_bases ATGGCAGACAAACGACAATCAAATAACCGTCGAATTAAACAAAACTTGGTGGAAGGATCTCGCTCCCAGCAAAATACAAA ACGAAAAAAGACTAATTTAGTTTTAAACGTTTTAATTATCGTGGTAAGCTTACTTATCATTGGTAGTTTGTATTTTGTGC TGTTTAAAACAGAGAGTGATCCTACGCAACAAGATAACAAAACGGCATCTTCCACTGCAAAAAAAGAAGATGCCGCTAAA TCATCCGAAAAGAAAAAAGATTCTTCAGATGATAAAACAACTGAAACAACCGAAAGCGATGATCCCAATGTAGCGAAAGT TATTACCAAAGATTGGAAACCTATTGGTACCGAACAAACTGGTGATCATGTGAATTCGTACAGTTCCACAAGTATAGATT GGCAAGAAAAACGTAAAGCTTTTTCTGCAGCAACTGATATCCCAATCTCAAATACGTCGCTTTGGTTTGTAGAGCAAGGA GCTGATCCTGCGACACAAGCAATTGGTACACTCTCTACTAAAGAAAACCCAGACAAAGCATATCGTGTTTATATTACCTG GGTTGACGGTGAAGGATGGCAACCAACCAAAGTGGAAGAGCTTAAAACAAATGACAAAAGATAA
Upstream 100 bases:
>100_bases CACCAGCTGGTGACATGAGCGTTAAAATCGAAAAAATCACTGCATCTTAATATTATCGGATGTTTTTATACAGCGGTTAC TTATAAGGTGGTGAATGCAA
Downstream 100 bases:
>100_bases AAGCACAGAAGTTAGCTGTTAACGACTGTGCTTTTTTGGAGGTTACATAATGACAATTGGTATTATTGGAGCAATGGAAG AAGAAGTAGAACTTTTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPTQQDNKTASSTAKKEDAAK SSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSIDWQEKRKAFSAATDIPISNTSLWFVEQG ADPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR
Sequences:
>Translated_207_residues MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPTQQDNKTASSTAKKEDAAK SSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSIDWQEKRKAFSAATDIPISNTSLWFVEQG ADPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR >Mature_206_residues ADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESDPTQQDNKTASSTAKKEDAAKS SEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQTGDHVNSYSSTSIDWQEKRKAFSAATDIPISNTSLWFVEQGA DPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23203; Mature: 23072
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESD CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC PTQQDNKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC GDHVNSYSSTSIDWQEKRKAFSAATDIPISNTSLWFVEQGADPATQAIGTLSTKENPDKA CCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCE YRVYITWVDGEGWQPTKVEELKTNDKR EEEEEEEECCCCCCCCHHHHHHCCCCC >Mature Secondary Structure ADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSLLIIGSLYFVLFKTESD CCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC PTQQDNKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDPNVAKVITKDWKPIGTEQT CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCC GDHVNSYSSTSIDWQEKRKAFSAATDIPISNTSLWFVEQGADPATQAIGTLSTKENPDKA CCHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCCCCCCE YRVYITWVDGEGWQPTKVEELKTNDKR EEEEEEEECCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA