Click here to switch to the map view.

The map label for this gene is yqjE [H]

Identifier: 226223976

GI number: 226223976

Start: 1383405

End: 1384502

Strand: Direct

Name: yqjE [H]

Synonym: Lm4b_01384

Alternate gene names: 226223976

Gene position: 1383405-1384502 (Clockwise)

Preceding gene: 226223975

Following gene: 226223977

Centisome position: 47.5

GC content: 37.52

Gene sequence:

>1098_bases
ATGATGATATCCAATGTAAAAAAATATTTTACCGAATTAATCCAAACTCCATCTGTCTCAGGGAAAGAAACAGCTATTTT
GACGTATATAAAAAAACATCTAGCAAAATTAAACATTGAATATAGTTTGGATGAAGATTATGGTTTAATTGCTCGAATTC
CTGCTACTAAAGAGAAATTTCCAACGATTTTTTTCTGTAGTCATGTGGATACGCATCCAAATGCGGCAACGCCAGTTTTC
CAAATGGAGCAAGATGTATTTACGGTAGAGGAAGGCACTTCTTTAGGTGCGGATGATAAAGCAGCAGTAGCAGCTATGTT
AGCGGCTATTGATTATTTTTGTGCAGAACGAACAGCTCATGGGGAGATTGAATTTATTTTCACGACGAAAGAAGAACTCG
GCATGATTGGAATGCGTTTATTTCCGGAAGAAAAAATTACGGCAGCTTATGGATACTGTTTAGATGCACCAGGTGAAGTC
GGAAATTATCAATTACAAGCAAATACGTTAGTCGCATTAGAATTTACTATTGCAAGTTCTGAAGCTGCCCAAATGTCACC
GATTTCTATAGCGAGAATGGCGTTACATGCCACGCGGCCAGGCAGAATTGACCGAGAAAACAAATGGGAAATTCAGTCGT
TTTCTGGTGGAATAAATGATGAAAATCAACAAGATGCCCAATTAGAAGTTCTTTTTACATCAGCAGCAAGTTTCCGTAAG
GCGCTTTTGCATATCCAGACCATTAGAGAACGATTTGCGCAAACTTGCGAGAAATATGGTGCTCTTTTGACGCATGATAC
AAAATTAATTTATGAAGGGTACCGAATTCGCTCTAAGCATCCACTAATGAATATTTTTCAAAAAGCCGCAAAAAAACAAT
CTTTGGAAACAAGAGAAATATTTTTAGAAGGCGGAACAGATGCAAATGTGTTGAATGAAAAAGGTATTCCGACCATGCTC
TTATCAGCTGGATACGAAAATGCGCACACAGAAGAAGAAACAGTATCTGTTGAGCAGTTAGAAAAACTTACTCAACTCGT
CATTGACTTAGCAGAATCCGCAAAAAACGAGAAAATTCTTCTCAGAAAACTAAATTAG

Upstream 100 bases:

>100_bases
TCATAAAGCATTTCAGATATATATATCTTACTTATAATTAAAGTAAATTTCAAGTCATTTATTGATTTTTAAAGCAAATA
GGAAGAATGTAGGTGGAAAA

Downstream 100 bases:

>100_bases
TGAAAAAAAGTCAAATAATTCGGATTGATTCATTGTCCAAGAAGCAATTCTTTGATATAGTAAATGATGTTGATACTTTT
ATGTGTCATGTTGAAGTAAG

Product: aminotripeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLDEDYGLIARIPATKEKFPTIFFCSHVDTHPNAATPVF
QMEQDVFTVEEGTSLGADDKAAVAAMLAAIDYFCAERTAHGEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEV
GNYQLQANTLVALEFTIASSEAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGINDENQQDAQLEVLFTSAASFRK
ALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRIRSKHPLMNIFQKAAKKQSLETREIFLEGGTDANVLNEKGIPTML
LSAGYENAHTEEETVSVEQLEKLTQLVIDLAESAKNEKILLRKLN

Sequences:

>Translated_365_residues
MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLDEDYGLIARIPATKEKFPTIFFCSHVDTHPNAATPVF
QMEQDVFTVEEGTSLGADDKAAVAAMLAAIDYFCAERTAHGEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEV
GNYQLQANTLVALEFTIASSEAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGINDENQQDAQLEVLFTSAASFRK
ALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRIRSKHPLMNIFQKAAKKQSLETREIFLEGGTDANVLNEKGIPTML
LSAGYENAHTEEETVSVEQLEKLTQLVIDLAESAKNEKILLRKLN
>Mature_365_residues
MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLDEDYGLIARIPATKEKFPTIFFCSHVDTHPNAATPVF
QMEQDVFTVEEGTSLGADDKAAVAAMLAAIDYFCAERTAHGEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEV
GNYQLQANTLVALEFTIASSEAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGINDENQQDAQLEVLFTSAASFRK
ALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRIRSKHPLMNIFQKAAKKQSLETREIFLEGGTDANVLNEKGIPTML
LSAGYENAHTEEETVSVEQLEKLTQLVIDLAESAKNEKILLRKLN

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.4.11.4 [C]

Molecular weight: Translated: 40849; Mature: 40849

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLDEDYGLIARIPATKEKF
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHC
PTIFFCSHVDTHPNAATPVFQMEQDVFTVEEGTSLGADDKAAVAAMLAAIDYFCAERTAH
CEEEEEECCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEVGNYQLQANTLVALEFTIASS
CCEEEEEECHHHHCCHHHEECCCHHHHHHHCEEECCCCCCCCEEEEECEEEEEEEEEECC
EAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGINDENQQDAQLEVLFTSAASFRK
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHH
ALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRIRSKHPLMNIFQKAAKKQSLETREI
HHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECEEECCCCHHHHHHHHHHHHHCCCCEEE
FLEGGTDANVLNEKGIPTMLLSAGYENAHTEEETVSVEQLEKLTQLVIDLAESAKNEKIL
EEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LRKLN
EEECC
>Mature Secondary Structure
MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLDEDYGLIARIPATKEKF
CCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCEEEECCCCHHHC
PTIFFCSHVDTHPNAATPVFQMEQDVFTVEEGTSLGADDKAAVAAMLAAIDYFCAERTAH
CEEEEEECCCCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCC
GEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEVGNYQLQANTLVALEFTIASS
CCEEEEEECHHHHCCHHHEECCCHHHHHHHCEEECCCCCCCCEEEEECEEEEEEEEEECC
EAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGINDENQQDAQLEVLFTSAASFRK
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEEHHHHHHHH
ALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRIRSKHPLMNIFQKAAKKQSLETREI
HHHHHHHHHHHHHHHHHHHCCEEECCCEEEEECEEECCCCHHHHHHHHHHHHHCCCCEEE
FLEGGTDANVLNEKGIPTMLLSAGYENAHTEEETVSVEQLEKLTQLVIDLAESAKNEKIL
EEECCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
LRKLN
EEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]