| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223201
Identifier: 226223201
GI number: 226223201
Start: 612203
End: 613234
Strand: Direct
Name: 226223201
Synonym: Lm4b_00598
Alternate gene names: NA
Gene position: 612203-613234 (Clockwise)
Preceding gene: 226223199
Following gene: 226223203
Centisome position: 21.02
GC content: 36.43
Gene sequence:
>1032_bases ATGCCAGATTTTTCATACGCAAAAATTACTAAACTCGTGGTCCATTTTGCTGGAAATAAAGCGAGAGAAGAAGGAACAGA AGTATCAGCGAATGTGCTCGCTGACATTGGCTCGGAAATGAATCAAACACTAGCTTCGATTTTCTTAGAGCCATTTAATA AAGATGAATATTATCAATTTACGCATGAAACAGATTTGGATTTTAATGAAGTTCGTACTTTTGCTGCGAATATGTTTGTC GCGGAGGACGAGTTTCTGGATGAATCCAAGAAGATTTTAGAGCATTTATATAGCGAAACAACCCACCCGAATATTAAAAG TGGCGATGTTTGGATTTTCTTTATTGAGGGCTGCGTTGTCGATGGTGATTTCACGAACGGAATCGGGATTTTTAAAGTCG AAAACAAAGAAGTTTTTCTTAAAAATGATTTCAATGGCAGAGAATTCCAAATTGGCTATGATAAAGGGATTACCGGGACG GATTTAGATAAAGGTTGCTTGGTTTTCAATGTGGATCATGACACGGGAAATAAAGTGTTGATTTTAGACCGGCTTAACCG CGGCGATTCGGTTTATTGGAAAGATAAGTTTTTGAGTATTGATAAGATAACCGATGAGAAATTTTACACGGAAGGTTTTG TGGAAGTTTGTACGGATTATATTAAACAACGCGAGGAATCACTGCTTGATAAATCTAATTTTGTAAAAGCGACATCGGAA TATTTAGCAGGAGAAGAGACGTTGAATATTGCTGAATTTGCTCGCACGACAATTGAAAAACCGGAAGAGATTACCGAATT CAATACAATGGTGGATACGTTCGAACGAGAAAACAATGTCCGTTTTCCAGAAACATTCCAATTAGATGAAGAAAAGCGCG AAAAACTATCGAAAAAAATACGTAAAACGATTAAGCTTGGCAAAAATATTTCGGTTGTTGTGAAAGATTTAGAACAGCTG GAAGAAACTGATTTTGTACAAGGATACGACGAGGAAAAAGGCAAAAACTATATGATTGTGTATTATGATTAA
Upstream 100 bases:
>100_bases GTCTTCAAAATCTGCTGGAATCATTACGTACCTCCATTTGTTCATAATAAATTTAGTATACAGGAAATACCTATTTTATA AAAGTTAGGATGATAAAGGA
Downstream 100 bases:
>100_bases ACGAAAAAACCGAGGATGCGGAATCCCCGGTTTTTTTGCTGTCTAAACGACGAACATAAAGTACAGTATAAACAGTACCA TCATCACGTACATAATCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFNKDEYYQFTHETDLDFNEVRTFAANMFV AEDEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT DLDKGCLVFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATSE YLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFERENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQL EETDFVQGYDEEKGKNYMIVYYD
Sequences:
>Translated_343_residues MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFNKDEYYQFTHETDLDFNEVRTFAANMFV AEDEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT DLDKGCLVFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATSE YLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFERENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQL EETDFVQGYDEEKGKNYMIVYYD >Mature_342_residues PDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFNKDEYYQFTHETDLDFNEVRTFAANMFVA EDEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTD LDKGCLVFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATSEY LAGEETLNIAEFARTTIEKPEEITEFNTMVDTFERENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQLE ETDFVQGYDEEKGKNYMIVYYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39734; Mature: 39603
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFNKDEYYQF CCCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE THETDLDFNEVRTFAANMFVAEDEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVV ECCCCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEE DGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTDLDKGCLVFNVDHDTGNKVL CCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEE ILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATSE EEEECCCCCEEEEEHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFERENNVRFPETFQLDEEKREKLSKKI HHCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH RKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKGKNYMIVYYD HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC >Mature Secondary Structure PDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTLASIFLEPFNKDEYYQF CCCHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE THETDLDFNEVRTFAANMFVAEDEFLDESKKILEHLYSETTHPNIKSGDVWIFFIEGCVV ECCCCCCHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEE DGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGTDLDKGCLVFNVDHDTGNKVL CCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEE ILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCTDYIKQREESLLDKSNFVKATSE EEEECCCCCEEEEEHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHH YLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFERENNVRFPETFQLDEEKREKLSKKI HHCCCHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH RKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKGKNYMIVYYD HHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA