| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223188
Identifier: 226223188
GI number: 226223188
Start: 601666
End: 602571
Strand: Direct
Name: 226223188
Synonym: Lm4b_00585
Alternate gene names: NA
Gene position: 601666-602571 (Clockwise)
Preceding gene: 226223186
Following gene: 226223199
Centisome position: 20.66
GC content: 31.24
Gene sequence:
>906_bases ATGTCCATTCAAACAATTTTTGGAAACGGCAAATATAATTGGATTAATATTGATACAGATAGTACAGATAATCTTGCGGA TTTTTACGAAAAATATCATATTGATGATGAAGTAATCGCCTATTCGATTGATAGAAATGAACGTGCGCATTTTGAATATG ATCAAAAGTCCAATACTTTTGTCATTGTGTTTAATGTGCCTGATCAAAGGAAAATGGATAACCATTATGAGACAATACCA ATGGTTTTTATAATAAAAGATAAGCAATTGATAACAATTACAAATAATGACAATCAATATATTACACGAAAAATGAAGCG TTATTTAAAAGAATCAGATGACGTAACTATTTTTCAATTTTTATTTAGTAGTTTGTATTTTATTATGGATGCTTTTTTTC CATATGTGGAAGAAATGGATACGGATAGAAGAACGATTAATGACAAATTGAAAATTAAAACGACGAAGAAAAATTTATTG TCATTATCTGATTTGGAAACTGGGATTGTTTATTTTGTTTCGGCATCTAAGCAAAATGCGGCGCTTCTGGAGCAAATGAA AGCCCATCTGATTTATCGTGAGCTTAATGAAGTGGAAAAGGAACAATTTGAAGATGCTTTAATTGAAGCGAGGCAACTGG TGGAAATGACGGGGCTGAGCTCTCAAATCTTACAGCAATTGTCAGGTACATATAATAATATTTTGAACAATAATTTGAAT GATACGATGAAAATTTTAACGGCGCTATCCATTTTATTGACGGTTCCTACTATTATTACGGGCTTCTTTGGAATGAACAT GCCACTTCCTTTAGAACATAATACGTTTGGTTGGATTGTGACGATTTTTATTAGTGTGATTCTATGGTTCGGACTTTCCT TTATTTTACGAAAATTAATGAGATAA
Upstream 100 bases:
>100_bases AGAATTTCCCAGATTCTGTGCTATAATTATGTAGAAATAGAGATGCTCTGAAAAATGAGACTCTCTTTTTTTATGACCTC ATGGAAAGTAGGATGAAAAA
Downstream 100 bases:
>100_bases CAAAAAAGCCCTTCTTTCGGATAGAAAGAAGGGCTTTTTGAATTAAATAATACCTTGAGAAATCATTGTGTCTGCTACTT TGAGGAATCCGGCGATATTT
Product: membrane protein
Products: NA
Alternate protein names: Mg2+ And Co2+ Transporter; Magnesium Transporter CorA Family; CorA-Like Mg2+ Transporter Protein; Magnesium/Cobalt Transporter CorA; Mg2+/Co2+ Transporter; Magnesium Transporter; Magnesium Transporter CorA; CorA Family Protein; Mg2+ Transporter Protein CorA Family Protein; Cationic Transporter; Magnesium And Cobalt Transporter; Mg2+ Transporter Protein CorA-Like Protein; Magnesium And Cobalt Transport Protein CorA; Mg2+ Transporter; Cation Transporter; Cations Transporter; Magnesium And Cobalt Transport Protein Cora; Mg2+ Or Co2+ Transporter; Transporter CorA Metal Ion Transporter Family; Mg2 And Co2 Transporter; CorA Mg2+ And Co2+ Transporters; CorA-Family Cationic Transporter; Metal Ion Transporter MIT Family; Magnesium Transporter CorA Family Protein; Metal Ion Transporter; CorA Family Cationic Transporter; Mg2+ Transporter Protein; Mg2+ Transporter Protein CorA-Like; Mg2+ Transporter Protein CorA-Like Family Protein; CorA-Like Protein; Metal Ion Transporter CorA Family
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSIQTIFGNGKYNWINIDTDSTDNLADFYEKYHIDDEVIAYSIDRNERAHFEYDQKSNTFVIVFNVPDQRKMDNHYETIP MVFIIKDKQLITITNNDNQYITRKMKRYLKESDDVTIFQFLFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLL SLSDLETGIVYFVSASKQNAALLEQMKAHLIYRELNEVEKEQFEDALIEARQLVEMTGLSSQILQQLSGTYNNILNNNLN DTMKILTALSILLTVPTIITGFFGMNMPLPLEHNTFGWIVTIFISVILWFGLSFILRKLMR
Sequences:
>Translated_301_residues MSIQTIFGNGKYNWINIDTDSTDNLADFYEKYHIDDEVIAYSIDRNERAHFEYDQKSNTFVIVFNVPDQRKMDNHYETIP MVFIIKDKQLITITNNDNQYITRKMKRYLKESDDVTIFQFLFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLL SLSDLETGIVYFVSASKQNAALLEQMKAHLIYRELNEVEKEQFEDALIEARQLVEMTGLSSQILQQLSGTYNNILNNNLN DTMKILTALSILLTVPTIITGFFGMNMPLPLEHNTFGWIVTIFISVILWFGLSFILRKLMR >Mature_300_residues SIQTIFGNGKYNWINIDTDSTDNLADFYEKYHIDDEVIAYSIDRNERAHFEYDQKSNTFVIVFNVPDQRKMDNHYETIPM VFIIKDKQLITITNNDNQYITRKMKRYLKESDDVTIFQFLFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLLS LSDLETGIVYFVSASKQNAALLEQMKAHLIYRELNEVEKEQFEDALIEARQLVEMTGLSSQILQQLSGTYNNILNNNLND TMKILTALSILLTVPTIITGFFGMNMPLPLEHNTFGWIVTIFISVILWFGLSFILRKLMR
Specific function: Unknown
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35287; Mature: 35156
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQTIFGNGKYNWINIDTDSTDNLADFYEKYHIDDEVIAYSIDRNERAHFEYDQKSNTF CCEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCEEECCCCCEE VIVFNVPDQRKMDNHYETIPMVFIIKDKQLITITNNDNQYITRKMKRYLKESDDVTIFQF EEEEECCCCHHCCCCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHH LFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLLSLSDLETGIVYFVSASKQNA HHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCHH ALLEQMKAHLIYRELNEVEKEQFEDALIEARQLVEMTGLSSQILQQLSGTYNNILNNNLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH DTMKILTALSILLTVPTIITGFFGMNMPLPLEHNTFGWIVTIFISVILWFGLSFILRKLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC R C >Mature Secondary Structure SIQTIFGNGKYNWINIDTDSTDNLADFYEKYHIDDEVIAYSIDRNERAHFEYDQKSNTF CEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCHHEEEEECCCCCCCEEECCCCCEE VIVFNVPDQRKMDNHYETIPMVFIIKDKQLITITNNDNQYITRKMKRYLKESDDVTIFQF EEEEECCCCHHCCCCCCEEEEEEEEECCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHH LFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLLSLSDLETGIVYFVSASKQNA HHHHHHHHHHHHHHHHHHCCCCHHHCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCHH ALLEQMKAHLIYRELNEVEKEQFEDALIEARQLVEMTGLSSQILQQLSGTYNNILNNNLN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHH DTMKILTALSILLTVPTIITGFFGMNMPLPLEHNTFGWIVTIFISVILWFGLSFILRKLM HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA