| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is gpmB [H]
Identifier: 226223186
GI number: 226223186
Start: 599489
End: 600184
Strand: Direct
Name: gpmB [H]
Synonym: Lm4b_00583
Alternate gene names: 226223186
Gene position: 599489-600184 (Clockwise)
Preceding gene: 226223185
Following gene: 226223188
Centisome position: 20.58
GC content: 37.07
Gene sequence:
>696_bases GTGGCAACAGGAAAACTGAATGTGTACTTAGTTAGGCATGGCAAAACGATGTTCAATACATCTCGTCGTGTGCAAGGCTG GTCAGATACACCATTAACAAATGAAGGAATCGAAGTGGCAGAATTTTTAGGTCGTGGCCTTCGTGAAACTCCCTTTGATG CTATTTATACGAGTGATCGTGGTCGAACAATTGAAACGGCAGGCATCATTTTACGTGAAAGCAAGCAGACGCATTTGGAA ATCAATGAACTACGTGATTTCCGTGAGTTTGGTTTTGGTAAATTTGAAGGTGAGTATGAAGATATTATGTTTGGAAAAGT GATGGAGCATCTTGGTTTCCAGTCGATGGAAGAAGCTTTTGAAAAATTTGGCGATGATGGTTATCAAATTATCTCGGAAA CTGTAGAAAAAATTGATGAAACTGGTATGTCCGAGAATTGGGATGAGATGGTTGCTAGATTAAAAAATGCTTTAGATACA GTTAGTGCAGAAAATCAGGTGGAAAATGCCAACGTTTTAGTTGTTTCTCACGGAATGGCTATTAATACGATTATTTCTTT CTTTGATAAGTCATTAATTAATCCAGACATAGCTAATGCAAGTGTTACAAGACTTGGATTTGAAAATGGCGAATGGACAA TTGAGACAGTGAATGATTTAAGTTACATTGAAGCAGGTAAATTAGTTTTAGTATAA
Upstream 100 bases:
>100_bases TGTGACAAAAGTTATTTTTGAAGATGGAGCATATTCGATTGAAGAACCTGGAAACATGTTTTATGTAGAAGCTGGAAAAA AGGCGCAAGGGGGAGTTTAA
Downstream 100 bases:
>100_bases AAAATCCAGAATGGCACTGAGGCCATTCTGGATTTTTTAAGTTATTTTACGAATTTAATACAAACTGGTTCAGGAACTTT TACATCTTTTTGAAGTAATG
Product: phosphoglycerate mutase
Products: NA
Alternate protein names: PGAM; Phosphoglyceromutase [H]
Number of amino acids: Translated: 231; Mature: 230
Protein sequence:
>231_residues MATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLGRGLRETPFDAIYTSDRGRTIETAGIILRESKQTHLE INELRDFREFGFGKFEGEYEDIMFGKVMEHLGFQSMEEAFEKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDT VSAENQVENANVLVVSHGMAINTIISFFDKSLINPDIANASVTRLGFENGEWTIETVNDLSYIEAGKLVLV
Sequences:
>Translated_231_residues MATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLGRGLRETPFDAIYTSDRGRTIETAGIILRESKQTHLE INELRDFREFGFGKFEGEYEDIMFGKVMEHLGFQSMEEAFEKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDT VSAENQVENANVLVVSHGMAINTIISFFDKSLINPDIANASVTRLGFENGEWTIETVNDLSYIEAGKLVLV >Mature_230_residues ATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLGRGLRETPFDAIYTSDRGRTIETAGIILRESKQTHLEI NELRDFREFGFGKFEGEYEDIMFGKVMEHLGFQSMEEAFEKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDTV SAENQVENANVLVVSHGMAINTIISFFDKSLINPDIANASVTRLGFENGEWTIETVNDLSYIEAGKLVLV
Specific function: Unknown
COG id: COG0406
COG function: function code G; Fructose-2,6-bisphosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate mutase family. GpmB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790856, Length=236, Percent_Identity=29.6610169491525, Blast_Score=84, Evalue=1e-17, Organism=Saccharomyces cerevisiae, GI6324857, Length=233, Percent_Identity=24.8927038626609, Blast_Score=65, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 - InterPro: IPR001345 - InterPro: IPR023086 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 26069; Mature: 25937
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLGRGLRETPFDAIYTSDR CCCCCEEEEEEECCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCC GRTIETAGIILRESKQTHLEINELRDFREFGFGKFEGEYEDIMFGKVMEHLGFQSMEEAF CCEEEHHHEEEECCCCHHEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHH EKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDTVSAENQVENANVLVVSHGMA HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHH INTIISFFDKSLINPDIANASVTRLGFENGEWTIETVNDLSYIEAGKLVLV HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCHHHHCCCCEEEC >Mature Secondary Structure ATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLGRGLRETPFDAIYTSDR CCCCEEEEEEECCCHHHCCCHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEECCC GRTIETAGIILRESKQTHLEINELRDFREFGFGKFEGEYEDIMFGKVMEHLGFQSMEEAF CCEEEHHHEEEECCCCHHEEHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHH EKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDTVSAENQVENANVLVVSHGMA HHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHH INTIISFFDKSLINPDIANASVTRLGFENGEWTIETVNDLSYIEAGKLVLV HHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA