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The map label for this gene is 226223153

Identifier: 226223153

GI number: 226223153

Start: 563168

End: 563611

Strand: Direct

Name: 226223153

Synonym: Lm4b_00550

Alternate gene names: NA

Gene position: 563168-563611 (Clockwise)

Preceding gene: 226223152

Following gene: 226223156

Centisome position: 19.33

GC content: 33.78

Gene sequence:

>444_bases
ATGTACAGTAATAGGAAAGAGAAGGTCGTTTTTACACTTATTATGTGTTCTTTGATGATTTTATGCATGAGCTCTTATAA
TATCTTTCTTGAAAATGGTATTGGCGCGAATTCCTTTATGATTATTTTAAAAGCATTTGTCCCGTTTCTTTTTATTGGAT
TTTTATTAGACTTTTTTGTTGTCGGAAAAATTGTGTATCGTCTACACGCCCATTTGGTTAGTGAAGATGCTTCGAAATTT
AAAAAGATCATTATGATGCAATTGTTGATGGTTACATTTATGTGTGTGCTTATGTCGACGCTTAGCCTGATTGTGAACCA
AGGCGAATGGAGTCATCTAGGTATTCTTATTTTGCGCAATTATTTTGTGGCTTTATTTTTGCAAATTTTTATCGTGTCAC
CGTTTGTGCGGTTAATTAGTCCGCGGATTTTTGCGCTTTTGTAA

Upstream 100 bases:

>100_bases
ACGTTTTGCTTGGATTTCCGAGCAAAACTTTTTTTGTAACAAAATTGTCACTTACGAAGAATTTTTTAATTTGCTACGAT
AGTTCTTTGGAGGTGAAATT

Downstream 100 bases:

>100_bases
AAATGAAAAACGCTTAGTCGAGTTTAGGCCCGGCTAAGCGTTTTGTTATTTATGTTCGGCATAATAAGCCTCGAGCGCGT
CTTCCACGGTTTTCTTCGTG

Product: YybC protein

Products: NA

Alternate protein names: YybC Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFMIILKAFVPFLFIGFLLDFFVVGKIVYRLHAHLVSEDASKF
KKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL

Sequences:

>Translated_147_residues
MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFMIILKAFVPFLFIGFLLDFFVVGKIVYRLHAHLVSEDASKF
KKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL
>Mature_147_residues
MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFMIILKAFVPFLFIGFLLDFFVVGKIVYRLHAHLVSEDASKF
KKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16962; Mature: 16962

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFMIILKAFVPFLFIGFLLDFFV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGKIVYRLHAHLVSEDASKFKKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YFVALFLQIFIVSPFVRLISPRIFALL
HHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFMIILKAFVPFLFIGFLLDFFV
CCCCHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGKIVYRLHAHLVSEDASKFKKIIMMQLLMVTFMCVLMSTLSLIVNQGEWSHLGILILRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
YFVALFLQIFIVSPFVRLISPRIFALL
HHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA