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The map label for this gene is yebA [H]

Identifier: 226223079

GI number: 226223079

Start: 485864

End: 488023

Strand: Reverse

Name: yebA [H]

Synonym: Lm4b_00475

Alternate gene names: 226223079

Gene position: 488023-485864 (Counterclockwise)

Preceding gene: 226223080

Following gene: 226223078

Centisome position: 16.76

GC content: 39.12

Gene sequence:

>2160_bases
ATGAAAAGATATTTAACGCTCGTCATGCTATTTATTCTATCTGTTTTGCTTATCTCTGAGTGGATTTATCCATTCGCAGA
GCTGACCGAACTCTCTACAGCAAACTGGATTATTTTGTTTATAACCCTTTCACTCGGTAGTTTTTTCCTCCGTTTGAAAT
ATTATTGGACAATCCCGCTTCATATCGTGATGATTATCTTCGTTTCAGGAATTTACTACGCTAAAGGTGGGATTTTGGCA
GGGAATTGGTTTGTTTCTTTTTTCCAAATCACCTTTAATGGGTTTAGAGATATGGTACAGTTTCGCTCGTCCGATATTTC
TATGGACTTTATTTTAATCGTTTTTTTAATTGCTTTATGGCTTTTGAGTTATATTACTACTTATAGTATTCTGCGCAAAC
AGCGGGTTATGAGTGTTTTAGTTTTAACTGTTGCTTATTTAGCGGTTATTAATACTTTTACAGATTATAACAGTAATTGG
GCCATCGTCCGAACTGTATTAGAAGGATTTTTATTACTTCATCTTGCACTGGCAAGTCGGATTGCAGCACCAAATAGAAT
TAGCGCGGACTCCTTAAAACGTAATGGTTTGTTTTATCATATTTTTGTGATTTTGTTACTGGCCGTATTTGTTTTTAGTT
CGTTAATGCTTCCGAAAAAAGCACCGATTTTCCCTGATCCGGTACCGACGATAAAAAATGCGCTTGGAATTAATACAACG
CGCACGGTGGGTTATAGTGAAGATGATACGACACTTGGTGGTGCTCTCAAAAAGGATAATGCTACTGTATTCACGGCCCG
GGCGGAAAAAGGGCATTACTGGCGTGTAGAATCGAAAACGGTCTATACTGGCACTGGCTGGGCAAATGCAAATTCCGCGG
ATGTCATATCTTTTTCTTCCGGTGATAATTTCCCTATTCAACTTACAGAACAAACAACTGGTGCTACAAACACGGCCGAA
ATTAGCTTTGCTTCTTCTAATGATTACATGCCTTATCCATATGGAACGCAAACAGTTAATGGCGCAGTAGATTCATTTAG
TGCCAATTTAACCATTGAGCGGGTTGGACCAGTGGATACAATCAAAAATTATACGGTCCAATTAAAAACACCCGTTTATA
ATATTGAAAAAATGCAGAATGCCGACTTTAGCACACTTTCTAACGCTTTTGTTTCCCAATATACCCAAACACCAAAAGAC
TTACCAGACCGGGTGACAAAACTTGCCAATAAAGTAACAAAAGACGCTGATTCAATTTATGACAAAACGAAAGCAATCGA
ACGCTATTTAAGCGCTTCTGGCACCTTTACTTATAGTACAGAGGATGCGAAAGAAACGCCTAGGGGAGCCGATTATGTCG
ATCAATTTTTATTTGAAACGCAAATTGGGTATTGTGACAATTTTTCTACTTCCATGGTAGTCATGCTTCGATCGCTTGGG
ATTCCAGCAAGATGGGCCAAGGGCTACACACCTGGTGAGGGTGAGAAAAAAGAAAATGATGCTAAAACGACTTATACAAT
CACAAATAACAATGCACATTCTTGGCCGGAAGTGTTTTTCCCAGGAACTGGATGGGTTCCATTTGAGCCAACAGCAACAT
TCTCCAATCCCGAAAACTTCCAAGAACCCACAACTGAAACAGCAAATAAACCTGAAACACCTAATGATAGTACGAGTACG
CCAGAAACACCAAATACAGCCGATAAAACACCAGAACAAGATAACGGTAGCAGCTCCACAGGTGAAACACCGAAAAAAGA
AGAACCTAAAACAGAAACAGCGGCCTCTAATTTCGAAATTCCGTCTTGGGTTTGGTGGATTCCTGCTGGACTAGTTGTGA
CACTGCTCGCACTAGCTATTATATTCAGACGTAGAATTCGTAGATATTTATTGCTTCGTTCTCTGAGAAATAGTCCAGAA
TTTGGCAAAACCTATCATAGACTTATGAAATTACTTGCTTCTTATGGTTATGTCCGCGAATCGAGTGAAACGTTACGTCA
TTTTAGCACCAGAGTGGATGCTGAATTAACAACGACAGAATTTTCGCGACTAACGAAAATGTATGAAGCCCAAATTTATA
GTAATAACTTAACGGAAAAAGTGATAACTGCGGAAGAAACGCAGCTTGTGCAACAAGTTATAGCTCGATTAACTAAATAA

Upstream 100 bases:

>100_bases
AAATCATTACTTTTCAATCAGAGCATTCTAAAGCGATGGATGCTCCAGCGATTTTCCTTGAGCCAGCAAGTCTTCTAAGC
AGATGGGAGCGTGAAGCTAA

Downstream 100 bases:

>100_bases
ACAGAGAAAAAGCGCCTAAGAAAATATTCATGGCGCTTTTTCTTATGTAATATTTTTATCTTTTCTTCGTAAATATGCGA
TAATGTTAACATGAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 719; Mature: 719

Protein sequence:

>719_residues
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILA
GNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNW
AIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTT
RTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAE
ISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKD
LPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLG
IPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTST
PETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPE
FGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK

Sequences:

>Translated_719_residues
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILA
GNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNW
AIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTT
RTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAE
ISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKD
LPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLG
IPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTST
PETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPE
FGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
>Mature_719_residues
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILA
GNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNW
AIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTT
RTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAE
ISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKD
LPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLG
IPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTST
PETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPE
FGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK

Specific function: Unknown

COG id: COG1305

COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002931 [H]

Pfam domain/function: PF01841 Transglut_core [H]

EC number: NA

Molecular weight: Translated: 81038; Mature: 81038

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHEEEHHH
HIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALW
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTT
HCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCC
RTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSS
EECCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEECCCEEEECCCCCCCCCCCEEEECC
GDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDT
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCHHCCCCCEEEEECCCHHH
IKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIY
HCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLG
HHHHHHHHHHHCCCCEEECCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
IPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENF
CCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
QEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHC
SSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLSLGSFFLRLKYYWTIPL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHEEEHHH
HIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFRSSDISMDFILIVFLIALW
HHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
LLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNWAIVRTVLEGFLLLHLALASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLPKKAPIFPDPVPTIKNALGINTT
HCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCC
RTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRVESKTVYTGTGWANANSADVISFSS
EECCCCCCCCCCCCCEECCCCEEEEEECCCCCEEEECCCEEEECCCCCCCCCCCEEEECC
GDNFPIQLTEQTTGATNTAEISFASSNDYMPYPYGTQTVNGAVDSFSANLTIERVGPVDT
CCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHCCCHHCCCCCEEEEECCCHHH
IKNYTVQLKTPVYNIEKMQNADFSTLSNAFVSQYTQTPKDLPDRVTKLANKVTKDADSIY
HCCCEEEEECCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
DKTKAIERYLSASGTFTYSTEDAKETPRGADYVDQFLFETQIGYCDNFSTSMVVMLRSLG
HHHHHHHHHHHCCCCEEECCCCHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCC
IPARWAKGYTPGEGEKKENDAKTTYTITNNNAHSWPEVFFPGTGWVPFEPTATFSNPENF
CCCHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCC
QEPTTETANKPETPNDSTSTPETPNTADKTPEQDNGSSSTGETPKKEEPKTETAASNFEI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCC
PSWVWWIPAGLVVTLLALAIIFRRRIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHHHC
SSETLRHFSTRVDAELTTTEFSRLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]