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The map label for this gene is yeaD [H]

Identifier: 226223080

GI number: 226223080

Start: 488020

End: 489168

Strand: Reverse

Name: yeaD [H]

Synonym: Lm4b_00476

Alternate gene names: 226223080

Gene position: 489168-488020 (Counterclockwise)

Preceding gene: 226223081

Following gene: 226223079

Centisome position: 16.79

GC content: 39.86

Gene sequence:

>1149_bases
ATGTTGAAAAAACGCCTCCTATTAGCATTTCGGTGGATTATTATGCTAATTATTTACGCTGGGCTTTGGACTTATACGTT
ATTTCAAGGTGATACTGCTAGCTGGTTTTTAACCTATTTCTTTAGTTTTATCCTGTTACTTTTATTTTTGTCCTCGATTT
ATCCACTAAAAGCGTGGAAAGTGAATCGGCGTTTTGTTAAAAATACCTATCATGATGGCGATTTAGTTGATATGCAAGTA
TCATTCACTCGAAAATCGCGTTATCCGGTGGGTTATTTGCTATTCCAACAAAAAATACCCGCTAGTTTTGGCAATGTGAG
CGCCCGCCAACAAGTGGTTTATCCGCTTTTTAAAAAGCATTTCACGGTCACACTAGCTGGATTTGTAGGCGTTCGTGGGA
TTCATTCATTTCCGCCAGTGGATGTAGAAACTAGTGATGCTTTCGGCTTGTTAGAACGTTCGCGCCAACTATCTTCCGAA
AAATCGCTCACTATTTATCCAACCTATTTTCCGGATGTATTAGAAAAAATCAGTGAAGCTTCTCCAGAAAACGAACGCAA
TGCCGCTTATTGGACGCTTAAGAAAAACAGCAATTTGCACAGTTTGCGCGAATTTTCTTCTGGTGACCGGATTTCTCTTA
TTGACTGGAAATCTTCTGCTAAAAGCGACCAACTGATGACTAGAGAATTTGAAAATAGTGCAACATCACGGTTATCCGTC
ATTTTTTACGGAGCGAGCCATCCCAATTTTGAATTATCACTTCGGGCGGCTTACTCGTTTATTCGCAAAATCTCCGAAGA
TAATGGAGAAATTCGTGTTACTCTTTTAGGCGATCAAACAAGTAAATTTGCTCCGGCGAAAGGTACGAGTAGACTTCAAG
ATATATCGACTGCTTTTGCAGAAATCGCCCCGGTAGATAGTTTAACGCTGCAAGAATCGCTTGATAGTAATTTACATTCT
GGAGAGAAAATCCTTCTATTCACGCCATGTATTGATACGATGTTAATGCAAAAAGTGACTCGTTTAACGGATAATAAACA
GCTCCAAATCATTACTTTTCAATCAGAGCATTCTAAAGCGATGGATGCTCCAGCGATTTTCCTTGAGCCAGCAAGTCTTC
TAAGCAGATGGGAGCGTGAAGCTAAATGA

Upstream 100 bases:

>100_bases
ATTTTGAAGTCTGAAGCTTATTATAATGAGGAAACAGCCGAATCCATTATTGCTTCCATTTTGAAAAACACGTCAGTTCC
GGTAGAAAAGAGGTAGCTAA

Downstream 100 bases:

>100_bases
AAAGATATTTAACGCTCGTCATGCTATTTATTCTATCTGTTTTGCTTATCTCTGAGTGGATTTATCCATTCGCAGAGCTG
ACCGAACTCTCTACAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLVDMQV
SFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSE
KSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSV
IFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHS
GEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK

Sequences:

>Translated_382_residues
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLVDMQV
SFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSE
KSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSV
IFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHS
GEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK
>Mature_382_residues
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLVDMQV
SFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSE
KSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSV
IFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFAEIAPVDSLTLQESLDSNLHS
GEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKAMDAPAIFLEPASLLSRWEREAK

Specific function: Unknown

COG id: COG1721

COG function: function code R; Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002881 [H]

Pfam domain/function: PF01882 DUF58 [H]

EC number: NA

Molecular weight: Translated: 43678; Mature: 43678

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWK
CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VNRRFVKNTYHDGDLVDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKH
HHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHH
FTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEA
HEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHC
SPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSV
CCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEE
IFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFA
EEEECCCCCEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
EIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKA
HHCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
MDAPAIFLEPASLLSRWEREAK
CCCCEEEECHHHHHHHHHHHCC
>Mature Secondary Structure
MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFILLLLFLSSIYPLKAWK
CCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHH
VNRRFVKNTYHDGDLVDMQVSFTRKSRYPVGYLLFQQKIPASFGNVSARQQVVYPLFKKH
HHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHH
FTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSEKSLTIYPTYFPDVLEKISEA
HEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHC
SPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKSSAKSDQLMTREFENSATSRLSV
CCCCCCCCEEEEEECCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCEEEE
IFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLLGDQTSKFAPAKGTSRLQDISTAFA
EEEECCCCCEEEEHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHH
EIAPVDSLTLQESLDSNLHSGEKILLFTPCIDTMLMQKVTRLTDNKQLQIITFQSEHSKA
HHCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCC
MDAPAIFLEPASLLSRWEREAK
CCCCEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377 [H]