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The map label for this gene is ybjY [C]

Identifier: 226222822

GI number: 226222822

Start: 193476

End: 194153

Strand: Direct

Name: ybjY [C]

Synonym: Lm4b_00190

Alternate gene names: 226222822

Gene position: 193476-194153 (Clockwise)

Preceding gene: 226222821

Following gene: 226222823

Centisome position: 6.64

GC content: 36.43

Gene sequence:

>678_bases
ATGAAAAAGTGGGTTAAATGGTTAATTGTTATCGTAATTATCGCAGTAGTAGCCGTTGGTGCGGTTTTCTTGCTGTCGAA
AAATAGTGGCTCCGTAACACAAGAAAAATTAGTTACAGCCAAAGTAAAACAAGGAGATATGAAAATCAATGCTACAGGAA
CAGGCGCGATTTCTCCGGTAAACACACAAGTTCCAGATTACGATGAACTTCAATTAGTAGCGCAAATGGACGAACTTGAT
ATTCCTAACATCAAGAAAGACCAAGAAGTAAAAGTCACAGTAACAGCACTACCTGACAAAACTTATACAGGAAAAGTGAA
AGAAATCGCAGAACAAGGTCAAGTACAAAATGGTGTGTCTAGCTTCTCTGTAATCATTTCTCTTGATAAAACAGACGATT
TAAAAGCGGGTATGACTGCTGATGCTTCCATTTTAGTAAATGAGAAAAAAGATGCGCTATACGTTCCAATTGAAGCTGTT
CAAAAAGACAGTGACGACAAATATTACGTATTAGTTCCAGAAGAAAAAGACAATGGGAAAACGAAAAAAGTGAAGAAATT
TGTAGAAACTGGTCTTCATAATGAAGATAATATCGAAATCACTAAAGGTGTTAAAAAAGGCGAAAAAGTAATTCTTCCTA
CACAAGAAACTTCTACGGTTCCTGGTGCTCCTAGCTAA

Upstream 100 bases:

>100_bases
CGATGTACTTCACTCAGTTAACTTTTATGGTAGAATGAATTCTATCGTTACTACATAAAATTCAAGGCTTCTAGACTTTA
GGAGCAGAAGGAGAACATTC

Downstream 100 bases:

>100_bases
GTTTTTTGTAAGTACAAATCAGACAAATTGTATGAAGGAGGGATAAACATGCCAAAACCGCTAATTGACATGAAAAATTT
AACAAAAACGTATACGCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Efflux Transporter MFP Subunit; Secretion Protein HlyD; Efflux Transporter Rnd Family Mfp Subunit; Secretion Protein HlyD Family Protein; Membrane-Fusion Protein; Efflux Transporter; Biotin/Lipoyl Attachment Domain-Containing Protein; Secretion Protein Hlyd; Membrane-Associated Protein; Periplasmic Component Of Efflux System; Membrane Permease Cation Efflux Pumps; Auxiliary Transport Protein MFP Family; RND Family Efflux Transporter Subunit MFP; PAS/PAC Sensor Protein; Multidrug Efflux System Transmembrane Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELD
IPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAV
QKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS

Sequences:

>Translated_225_residues
MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELD
IPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAV
QKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS
>Mature_225_residues
MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPVNTQVPDYDELQLVAQMDELD
IPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAV
QKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24469; Mature: 24469

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPV
CHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHEEECCCCEEEEECCCCCCCCC
NTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVS
CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCHHHCCCC
SFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGK
EEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHCCCCCCCEEEEEECCCCCCH
TKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS
HHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQGDMKINATGTGAISPV
CHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHEEECCCCEEEEECCCCCCCCC
NTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTYTGKVKEIAEQGQVQNGVS
CCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHCHHHCCCC
SFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAVQKDSDDKYYVLVPEEKDNGK
EEEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEHHHHCCCCCCCEEEEEECCCCCCH
TKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETSTVPGAPS
HHHHHHHHHHCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA