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The map label for this gene is yhbQ [C]

Identifier: 226222799

GI number: 226222799

Start: 166066

End: 166335

Strand: Direct

Name: yhbQ [C]

Synonym: Lm4b_00167

Alternate gene names: 226222799

Gene position: 166066-166335 (Clockwise)

Preceding gene: 226222798

Following gene: 226222800

Centisome position: 5.7

GC content: 37.04

Gene sequence:

>270_bases
ATGGCGAAAGCGAGTGAACATTTCTTTTATGTGCTAAAATGTAGTGACAATTCCTATTATGGTGGCTATACAACAGATGT
TATTCGCCGAGAAGCGGAACATAATGCGGGAATTAGATGTAAATATACAAAAACACGTCGCCCGGTAAAAGTCATTCATT
TTGAAAAATTCGAAACAAGAAGTGAAGCTACAAAAGCAGAAGCTGCGTTCAAAAAATTATCACGTAAAAATAAAGACGCC
TATTTAATACAACGGGAGGAGTCCGAATGA

Upstream 100 bases:

>100_bases
GAAGGAATCAAAGACGGGAAACCTGGCGTGAAATATGTTCCACCTGTTATCGTATATGATGAGCTAGGGGAATATACACC
AGTAATTAAGGAGATTTTAT

Downstream 100 bases:

>100_bases
TAAAAAGCCAAAAGAGTTTCAGTGGAGCCAGCCAAGGAGCATTATATTTAGTGCCAACGCCGATTGGTAATTTAGAAGAT
ATGACTTTTCGTGCAATTCG

Product: GIY-YIG nuclease superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MAKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDA
YLIQREESE

Sequences:

>Translated_89_residues
MAKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDA
YLIQREESE
>Mature_88_residues
AKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTKTRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDAY
LIQREESE

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 10474; Mature: 10343

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTKTRRPVKVIHFEKFETR
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCH
SEATKAEAAFKKLSRKNKDAYLIQREESE
HHHHHHHHHHHHHHCCCCCEEEEEECCCC
>Mature Secondary Structure 
AKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTKTRRPVKVIHFEKFETR
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCEEEEEEECCCCH
SEATKAEAAFKKLSRKNKDAYLIQREESE
HHHHHHHHHHHHHHCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA