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The map label for this gene is rsmI [H]

Identifier: 226222800

GI number: 226222800

Start: 166332

End: 167213

Strand: Direct

Name: rsmI [H]

Synonym: Lm4b_00168

Alternate gene names: 226222800

Gene position: 166332-167213 (Clockwise)

Preceding gene: 226222799

Following gene: 226222802

Centisome position: 5.71

GC content: 40.14

Gene sequence:

>882_bases
ATGATAAAAAGCCAAAAGAGTTTCAGTGGAGCCAGCCAAGGAGCATTATATTTAGTGCCAACGCCGATTGGTAATTTAGA
AGATATGACTTTTCGTGCAATTCGCATGCTTAAAGAAGCGGATATTATTGCAGCGGAAGATACGCGGAACACCGTGAAAC
TTTTAAATCATTTTGAAATTACAACCCGAATGACGAGCTACCATCAGTTTACGAAGGAAAATAAAGAAGATAATATTATT
CAGCGGATGTTAGACGGTGAAGTGGTGGCGCTTGTTAGTGATGCGGGGATGCCATCTATTTCTGACCCGGGATACGAACT
TGTTCAAAGTGCGCTAAATGCTAATATTCCTGTCATCCCTCTACCAGGAGCCAATGCTGCATTAACTGCACTGATTGCAT
CTGGTCTTGCCCCGCAGCCGTTTTACTTTTACGGATTTCTTCCACGCCAAAATAAAGAACGTACTCAAGCGATTGAAAAA
TTAGCGGCGCGCGAAGAAACGTGGATTTTATATGAATCACCACATCGTTTAAAAGAAACACTAAAAGCAATCATCAAAAT
CACTGGAAATGATCGGAAAATTGTCTTGTGTCGAGAGCTCACAAAAAGATTTGAAGAATTTTTACGTGGAACGGTTGAAG
ATGCGTTAAACTGGGCAATGGACGAAGAAGTTCGCGGAGAATTTTGCTTGATTATTGAAGGAAATGCCAATCCACCGCTT
GCAGAAGAGCAACTCTGGTGGCAAGAACTCGATATTAAAACGCACGTAAGCACCGTAATGGAACAGGAAAATGTTAGTTC
TAAAGATGCAATTAAAATGGTTATGAAAGCGAGAAATTTACCAAAACGAGAAGTTTACTCTGCTTATCATGAAATAAAAT
AA

Upstream 100 bases:

>100_bases
AATTCGAAACAAGAAGTGAAGCTACAAAAGCAGAAGCTGCGTTCAAAAAATTATCACGTAAAAATAAAGACGCCTATTTA
ATACAACGGGAGGAGTCCGA

Downstream 100 bases:

>100_bases
AATCATGCGCGAATCCTTTAATGGGAACTCGCGCATGATTTTTTTTATAATGTATCACCAAAGCGGCGTTTAATTTCTTC
CATTAATTCCGCAGCGCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNII
QRMLDGEVVALVSDAGMPSISDPGYELVQSALNANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK
LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEVRGEFCLIIEGNANPPL
AEEQLWWQELDIKTHVSTVMEQENVSSKDAIKMVMKARNLPKREVYSAYHEIK

Sequences:

>Translated_293_residues
MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNII
QRMLDGEVVALVSDAGMPSISDPGYELVQSALNANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK
LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEVRGEFCLIIEGNANPPL
AEEQLWWQELDIKTHVSTVMEQENVSSKDAIKMVMKARNLPKREVYSAYHEIK
>Mature_293_residues
MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNII
QRMLDGEVVALVSDAGMPSISDPGYELVQSALNANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK
LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEVRGEFCLIIEGNANPPL
AEEQLWWQELDIKTHVSTVMEQENVSSKDAIKMVMKARNLPKREVYSAYHEIK

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=233, Percent_Identity=45.9227467811159, Blast_Score=210, Evalue=9e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 33229; Mature: 33229

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEI
CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
TTRMTSYHQFTKENKEDNIIQRMLDGEVVALVSDAGMPSISDPGYELVQSALNANIPVIP
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE
LPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKET
CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
LKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEVRGEFCLIIEGNANPPL
HHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
AEEQLWWQELDIKTHVSTVMEQENVSSKDAIKMVMKARNLPKREVYSAYHEIK
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIAAEDTRNTVKLLNHFEI
CCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
TTRMTSYHQFTKENKEDNIIQRMLDGEVVALVSDAGMPSISDPGYELVQSALNANIPVIP
HHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEE
LPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEKLAAREETWILYESPHRLKET
CCCCHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHH
LKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNWAMDEEVRGEFCLIIEGNANPPL
HHHHHEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCC
AEEQLWWQELDIKTHVSTVMEQENVSSKDAIKMVMKARNLPKREVYSAYHEIK
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]