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The map label for this gene is yabB [H]

Identifier: 226222798

GI number: 226222798

Start: 165309

End: 166082

Strand: Direct

Name: yabB [H]

Synonym: Lm4b_00166

Alternate gene names: 226222798

Gene position: 165309-166082 (Clockwise)

Preceding gene: 226222797

Following gene: 226222799

Centisome position: 5.68

GC content: 38.24

Gene sequence:

>774_bases
TTGCTAGAAAAGGTGAATCATTTGGAAAAACTCGAATTAATTGGTGATGAAAGACTAGATTATTTACTAGCAGAAAATTT
GCGGATTATTCAAAGCCCATCGGTATTTTCTTTCTCTATAGACGCGGTTCTCCTCGCTAAATTTAGTTATTTACCAATCC
GTAAAGGGAAAATAATTGATTTGTGTAGCGGAAATGGGATTATTCCTTTACTACTTAGTACGCGAACAAAAGCGAAAATA
GTTGGTGTTGAAATTCAAGAACGTCTGGCAGATATGGCGAAAAGAAGTGTTGCTTATAATCAACTGGAAGACCAAATCGA
AATAATCGAATATGATTTGAAAAAAATTACAGATCTTATTCCAAAAGAGCGCGCGGACATTGTTACCTGTAATCCACCTT
ATTTTGCAACCCCGGATACAAGTTTGAAAAATACCAATGAACATTTTCGGATTGCTCGCCATGAAGTTATGTGTACGCTA
GAGGATACTATTCGTGTAGCCGCAAGCCTTTTAAAACAAGGTGGAAAAGCGAATTTTGTTCATCGTCCGGAACGATTACT
AGACATCATTGATATAATGAGAAAATATCGCTTGGAACCGAAACGCATTCAATTCGTGCACCCGCGCTCAGATAGAGAAG
CGAATACGGTGCTTGTAGAAGGAATCAAAGACGGGAAACCTGGCGTGAAATATGTTCCACCTGTTATCGTATATGATGAG
CTAGGGGAATATACACCAGTAATTAAGGAGATTTTATATGGCGAAAGCGAGTGA

Upstream 100 bases:

>100_bases
CGGCAGCCCGCGTGGTAATGATGAAGATTGTTTATTTTGCTTATCCTTGCTCAATAAAAAATAACATGACGGGCCTTTCT
CAATTCAAGAGAAGGGCTTT

Downstream 100 bases:

>100_bases
ACATTTCTTTTATGTGCTAAAATGTAGTGACAATTCCTATTATGGTGGCTATACAACAGATGTTATTCGCCGAGAAGCGG
AACATAATGCGGGAATTAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MLEKVNHLEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKI
VGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL
EDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDE
LGEYTPVIKEILYGESE

Sequences:

>Translated_257_residues
MLEKVNHLEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKI
VGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL
EDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDE
LGEYTPVIKEILYGESE
>Mature_257_residues
MLEKVNHLEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTKAKI
VGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTL
EDTIRVAASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDE
LGEYTPVIKEILYGESE

Specific function: Unknown

COG id: COG4123

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS [H]

EC number: NA

Molecular weight: Translated: 29344; Mature: 29344

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKVNHLEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIID
CCCHHHHHHHHHHHCHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHHHCCCCCCCCEEE
LCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI
EECCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV
CCCCCCEEECCCCCCCCCCCCCCCCCHHHHEEHHHHEEEHHHHHHHHHHHHHCCCCCCCC
HRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDE
CCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEHH
LGEYTPVIKEILYGESE
HCCHHHHHHHHHCCCCC
>Mature Secondary Structure
MLEKVNHLEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIID
CCCHHHHHHHHHHHCHHHHHHHHHCCCEEEECCCEEEEEHHHHHHHHHHCCCCCCCCEEE
LCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLI
EECCCCEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFV
CCCCCCEEECCCCCCCCCCCCCCCCCHHHHEEHHHHEEEHHHHHHHHHHHHHCCCCCCCC
HRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDGKPGVKYVPPVIVYDE
CCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCEEEEHH
LGEYTPVIKEILYGESE
HCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]